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argupta
openfpm_numerics
Commits
12bb7038
Commit
12bb7038
authored
Oct 24, 2016
by
incardon
Browse files
Adding jenkins pipeline
parent
c476b51f
Changes
6
Hide whitespace changes
Inline
Side-by-side
Jenkinsfile
0 → 100644
View file @
12bb7038
#
!
groovy
parallel
(
"nyu"
:
{
node
(
'nyu'
)
{
deleteDir
()
checkout
scm
stage
(
'build_nyu'
)
{
sh
"./build.sh $WORKSPACE $NODE_NAME"
}
stage
(
'run_nyu'
)
{
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 2"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 3"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 4"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 5"
}
}
},
"sb15"
:
{
node
(
'sbalzarini-mac-15'
)
{
deleteDir
()
env
.
PATH
=
"/usr/local/bin:${env.PATH}"
checkout
scm
stage
(
'build_sb15'
)
{
sh
"./build.sh $WORKSPACE $NODE_NAME NO"
}
stage
(
'run_sb15'
)
{
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 2"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 3"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 4"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 5"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 6"
sh
"cd openfpm_vcluster && ./run.sh $WORKSPACE $NODE_NAME 7"
}
}
}
)
configure.ac
View file @
12bb7038
...
...
@@ -159,6 +159,14 @@ AX_LIB_HILBERT([],[echo "Cannot detect libhilbert, use the --with-libhilbert opt
INCLUDES_PATH+=" -I/usr/local/include -I. -I../../openfpm_devices/src -I../../openfpm_data/src -I../../openfpm_io/src -I../../openfpm_vcluster/src -I../../src"
####### Detect OpenMP
AX_OPENMP([CFLAGS="$OPENMP_CFLAGS"
LDFLAGS="$OPENMP_LDFLAGS"],[])
AC_SUBST(OPENMP_CFLAGS)
AC_SUBST(OPENMP_LDFLAGS)
###### Check for se-class1
AC_MSG_CHECKING(whether to build with security enhancement class1)
...
...
run.sh
0 → 100755
View file @
12bb7038
#! /bin/bash
echo
"RUN numerics test"
source
$HOME
/openfpm_vars
mpirun
-np
$3
./src/numerics
if
[
$?
-ne
0
]
;
then
curl
-X
POST
--data
"payload={
\"
icon_emoji
\"
:
\"
:jenkins:
\"
,
\"
username
\"
:
\"
jenkins
\"
,
\"
attachments
\"
:[{
\"
title
\"
:
\"
Error:
\"
,
\"
color
\"
:
\"
#FF0000
\"
,
\"
text
\"
:
\"
$2
failed to complete the openfpm_numerics test
\"
}] }"
https://hooks.slack.com/services/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
exit
1
;
fi
curl
-X
POST
--data
"payload={
\"
icon_emoji
\"
:
\"
:jenkins:
\"
,
\"
username
\"
:
\"
jenkins
\"
,
\"
attachments
\"
:[{
\"
title
\"
:
\"
Info:
\"
,
\"
color
\"
:
\"
#00FF00
\"
,
\"
text
\"
:
\"
$2
completed succeffuly the openfpm_numerics test
\"
}] }"
https://hooks.slack.com/services/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
src/FiniteDifference/Average.hpp
View file @
12bb7038
...
...
@@ -45,7 +45,7 @@ class Avg
* In case of non staggered case this function just return a null grid_key, in case of staggered,
* it calculate how the operator shift the calculation in the cell
*
* \param position where we are calculating the derivative
* \param
pos
position where we are calculating the derivative
* \param gs Grid info
* \param s_pos staggered position of the properties
*
...
...
@@ -77,7 +77,7 @@ class Avg<d,arg,Sys_eqs,CENTRAL>
* conditions it is a distributed map
*
* \param g_map It is the map explained in FDScheme
* \param k
_
map position where the average is calculated
* \param kmap position where the average is calculated
* \param gs Grid info
* \param cols non-zero colums calculated by the function
* \param coeff coefficent (constant in front of the derivative)
...
...
@@ -113,7 +113,7 @@ class Avg<d,arg,Sys_eqs,CENTRAL>
*
* It follow the same concept of central derivative
*
* \param position where we are calculating the derivative
* \param
pos
position where we are calculating the derivative
* \param gs Grid info
* \param s_pos staggered position of the properties
*
...
...
@@ -160,7 +160,7 @@ class Avg<d,arg,Sys_eqs,FORWARD>
* conditions it is a distributed map
*
* \param g_map It is the map explained in FDScheme
* \param k
_
map position where the average is calculated
* \param kmap position where the average is calculated
* \param gs Grid info
* \param cols non-zero colums calculated by the function
* \param coeff coefficent (constant in front of the derivative)
...
...
@@ -188,7 +188,7 @@ class Avg<d,arg,Sys_eqs,FORWARD>
* In case of non staggered case this function just return a null grid_key, in case of staggered,
* the FORWARD scheme return the position of the staggered property
*
* \param position where we are calculating the derivative
* \param
pos
position where we are calculating the derivative
* \param gs Grid info
* \param s_pos staggered position of the properties
*
...
...
@@ -220,7 +220,7 @@ class Avg<d,arg,Sys_eqs,BACKWARD>
* conditions it is a distributed map
*
* \param g_map It is the map explained in FDScheme
* \param k
_
map position where the average is calculated
* \param kmap position where the average is calculated
* \param gs Grid info
* \param cols non-zero colums calculated by the function
* \param coeff coefficent (constant in front of the derivative)
...
...
@@ -247,7 +247,7 @@ class Avg<d,arg,Sys_eqs,BACKWARD>
* In case of non staggered case this function just return a null grid_key, in case of staggered,
* the BACKWARD scheme return the position of the staggered property
*
* \param position where we are calculating the derivative
* \param
pos
position where we are calculating the derivative
* \param gs Grid info
* \param s_pos staggered position of the properties
*
...
...
src/FiniteDifference/eq_unit_test_3d.hpp
View file @
12bb7038
...
...
@@ -83,14 +83,13 @@ const bool lid_nn_3d_petsc::boundary[] = {NON_PERIODIC,NON_PERIODIC,NON_PERIODIC
// Constant Field
struct
eta
{
//! define that eta is a constant field
typedef
void
const_field
;
//! therutn the value of the constant
static
float
val
()
{
return
1.0
;}
};
//#define SYSEQ_TYPE lid_nn_3d_eigen;
//#include "Equations/stoke_flow_eq_3d.hpp"
template
<
typename
solver_type
,
typename
lid_nn_3d
>
void
lid_driven_cavity_3d
()
{
#include "Equations/stoke_flow_eq_3d.hpp"
...
...
src/Makefile.am
View file @
12bb7038
LINKLIBS
=
$(LIBHILBERT_LIB)
$(PETSC_LIB)
$(SUITESPARSE_LIBS)
$(LAPACK_LIBS)
$(BLAS_LIBS)
$(METIS_LIB)
$(PARMETIS_LIB)
$(DEFAULT_LIB)
$(PTHREAD_LIBS)
$(OPT_LIBS)
$(BOOST_LDFLAGS)
$(BOOST_PROGRAM_OPTIONS_LIB)
$(BOOST_IOSTREAMS_LIB)
$(HDF5_LDFLAGS)
$(HDF5_LIBS)
$(LIBQUADMATH)
LINKLIBS
=
$(OPENMP_LDFLAGS)
$(LIBHILBERT_LIB)
$(PETSC_LIB)
$(SUITESPARSE_LIBS)
$(LAPACK_LIBS)
$(BLAS_LIBS)
$(METIS_LIB)
$(PARMETIS_LIB)
$(DEFAULT_LIB)
$(PTHREAD_LIBS)
$(OPT_LIBS)
$(BOOST_LDFLAGS)
$(BOOST_PROGRAM_OPTIONS_LIB)
$(BOOST_IOSTREAMS_LIB)
$(HDF5_LDFLAGS)
$(HDF5_LIBS)
$(LIBQUADMATH)
$(OPENMP_LDFLAGS)
noinst_PROGRAMS
=
numerics
numerics_SOURCES
=
main.cpp ../../openfpm_vcluster/src/VCluster.cpp ../../openfpm_devices/src/memory/HeapMemory.cpp ../../openfpm_devices/src/memory/PtrMemory.cpp ../../openfpm_devices/src/Memleak_check.cpp
numerics_CXXFLAGS
=
$(LIBHILBERT_INCLUDE)
$(AM_CXXFLAGS)
$(HDF5_CPPFLAGS)
$(INCLUDES_PATH)
$(BOOST_CPPFLAGS)
$(SUITESPARSE_INCLUDE)
$(METIS_INCLUDE)
$(PARMETIS_INCLUDE)
$(EIGEN_INCLUDE)
$(PETSC_INCLUDE)
-Wno-deprecated-declarations
-Wno-unused-local-typedefs
numerics_CXXFLAGS
=
$(OPENMP_CFLAGS)
$(LIBHILBERT_INCLUDE)
$(AM_CXXFLAGS)
$(HDF5_CPPFLAGS)
$(INCLUDES_PATH)
$(BOOST_CPPFLAGS)
$(SUITESPARSE_INCLUDE)
$(METIS_INCLUDE)
$(PARMETIS_INCLUDE)
$(EIGEN_INCLUDE)
$(PETSC_INCLUDE)
-Wno-deprecated-declarations
-Wno-unused-local-typedefs
numerics_CFLAGS
=
$(CUDA_CFLAGS)
numerics_LDADD
=
$(LINKLIBS)
-lparmetis
-lmetis
nobase_include_HEADERS
=
Matrix/SparseMatrix.hpp Matrix/SparseMatrix_Eigen.hpp Matrix/SparseMatrix_petsc.hpp
\
...
...
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