Commit f0f5fc63 authored by incardon's avatar incardon

Small refactor

parent 4e569e3b
......@@ -12,7 +12,6 @@
#include "Grid/grid_dist_id.hpp"
#include "Grid/Iterators/grid_dist_id_iterator_sub.hpp"
#include "eq.hpp"
#include "data_type/scalar.hpp"
#include "NN/CellList/CellDecomposer.hpp"
#include "Grid/staggered_dist_grid_util.hpp"
#include "Grid/grid_dist_id.hpp"
......@@ -127,7 +126,7 @@ class FDScheme
public:
//! Distributed grid map
typedef grid_dist_id<Sys_eqs::dims,typename Sys_eqs::stype,scalar<size_t>,typename Sys_eqs::b_grid::decomposition::extended_type> g_map_type;
typedef grid_dist_id<Sys_eqs::dims,typename Sys_eqs::stype,aggregate<size_t>,typename Sys_eqs::b_grid::decomposition::extended_type> g_map_type;
//! Type that specify the properties of the system of equations
typedef Sys_eqs Sys_eqs_typ;
......
......@@ -37,7 +37,7 @@ struct sys_nn
typedef float stype;
//! Base grid
typedef grid_dist_id<dims,stype,scalar<float>,CartDecomposition<2,stype> > b_grid;
typedef grid_dist_id<dims,stype,aggregate<float>,CartDecomposition<2,stype> > b_grid;
//! specify that we are on testing
typedef void testing;
......@@ -60,7 +60,7 @@ struct sys_pp
typedef float stype;
//! Base grid
typedef grid_dist_id<dims,stype,scalar<float>,CartDecomposition<2,stype> > b_grid;
typedef grid_dist_id<dims,stype,aggregate<float>,CartDecomposition<2,stype> > b_grid;
//! Indicate we are on testing
typedef void testing;
......@@ -89,7 +89,7 @@ struct syss_nn
typedef float stype;
//! Base grid
typedef grid_dist_id<dims,stype,scalar<float>,CartDecomposition<2,stype> > b_grid;
typedef grid_dist_id<dims,stype,aggregate<float>,CartDecomposition<2,stype> > b_grid;
//! Indicate we are on testing
typedef void testing;
......@@ -115,7 +115,7 @@ struct syss_pp
typedef float stype;
//! Base grid
typedef grid_dist_id<dims,stype,scalar<float>,CartDecomposition<2,stype> > b_grid;
typedef grid_dist_id<dims,stype,aggregate<float>,CartDecomposition<2,stype> > b_grid;
//! Indicate we are on testing
typedef void testing;
......
......@@ -14,7 +14,6 @@
//#define PERIODIC true
//#define NON_PERIODIC false
#include "data_type/scalar.hpp"
#include "util/util_num.hpp"
/*! \brief Equation
......
......@@ -13,7 +13,6 @@
#include "FiniteDifference/sum.hpp"
#include "FiniteDifference/mul.hpp"
#include "Grid/grid_dist_id.hpp"
#include "data_type/scalar.hpp"
#include "Decomposition/CartDecomposition.hpp"
#include "Vector/Vector.hpp"
#include "Solvers/umfpack_solver.hpp"
......
......@@ -14,7 +14,6 @@
#include "FiniteDifference/sum.hpp"
#include "FiniteDifference/mul.hpp"
#include "Grid/grid_dist_id.hpp"
#include "data_type/scalar.hpp"
#include "Decomposition/CartDecomposition.hpp"
#include "Vector/Vector.hpp"
#include "Solvers/umfpack_solver.hpp"
......
......@@ -55,7 +55,7 @@ struct const_mul_functor_value
const grid_sm<last::dims,void> & gs;
//! grid mapping
const grid_dist_id<last::dims,typename last::stype,scalar<size_t>,typename last::b_grid::decomposition::extended_type> & g_map;
const grid_dist_id<last::dims,typename last::stype,aggregate<size_t>,typename last::b_grid::decomposition::extended_type> & g_map;
//! grid position
grid_dist_key_dx<last::dims> & kmap;
......@@ -76,7 +76,7 @@ struct const_mul_functor_value
* \param coeff multiplication coefficent
*
*/
const_mul_functor_value(const grid_dist_id<last::dims,typename last::stype,scalar<size_t>,typename last::b_grid::decomposition::extended_type> & g_map,
const_mul_functor_value(const grid_dist_id<last::dims,typename last::stype,aggregate<size_t>,typename last::b_grid::decomposition::extended_type> & g_map,
grid_dist_key_dx<last::dims> & kmap,
const grid_sm<last::dims,void> & gs,
typename last::stype (& spacing)[last::dims],
......@@ -137,7 +137,7 @@ struct mul
* \param coeff coefficent (constant in front of the derivative)
*
*/
inline static void value(const grid_dist_id<Sys_eqs::dims,typename Sys_eqs::stype,scalar<size_t>,typename Sys_eqs::b_grid::decomposition::extended_type> & g_map,
inline static void value(const grid_dist_id<Sys_eqs::dims,typename Sys_eqs::stype,aggregate<size_t>,typename Sys_eqs::b_grid::decomposition::extended_type> & g_map,
grid_dist_key_dx<Sys_eqs::dims> & kmap,
const grid_sm<Sys_eqs::dims,void> & gs,
typename Sys_eqs::stype (& spacing )[Sys_eqs::dims],
......
......@@ -3,7 +3,7 @@ LINKLIBS = $(HDF5_LDFLAGS) $(HDF5_LIBS) $(OPENMP_LDFLAGS) $(LIBHILBERT_LIB) $(P
noinst_PROGRAMS = numerics
numerics_SOURCES = main.cpp Solvers/petsc_solver_unit_tests.cpp ../../openfpm_vcluster/src/VCluster/VCluster.cpp ../../openfpm_devices/src/memory/HeapMemory.cpp ../../openfpm_devices/src/memory/PtrMemory.cpp ../../openfpm_devices/src/Memleak_check.cpp
numerics_CXXFLAGS = $(HDF5_CPPFLAGS) $(OPENMP_CFLAGS) $(LIBHILBERT_INCLUDE) $(AM_CXXFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) $(SUITESPARSE_INCLUDE) $(METIS_INCLUDE) $(PARMETIS_INCLUDE) $(EIGEN_INCLUDE) $(PETSC_INCLUDE) -Wno-deprecated-declarations -Wno-unused-local-typedefs
numerics_CXXFLAGS = -Wno-unknown-pragmas -Wno-int-in-bool-context $(HDF5_CPPFLAGS) $(OPENMP_CFLAGS) $(LIBHILBERT_INCLUDE) $(AM_CXXFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) $(SUITESPARSE_INCLUDE) $(METIS_INCLUDE) $(PARMETIS_INCLUDE) $(EIGEN_INCLUDE) $(PETSC_INCLUDE) -Wno-deprecated-declarations -Wno-unused-local-typedefs
numerics_CFLAGS = $(CUDA_CFLAGS)
numerics_LDADD = $(LINKLIBS) -lparmetis -lmetis
nobase_include_HEADERS = Matrix/SparseMatrix.hpp Matrix/SparseMatrix_Eigen.hpp Matrix/SparseMatrix_petsc.hpp \
......
......@@ -8,7 +8,7 @@
#ifndef OPENFPM_NUMERICS_SRC_INTERPOLATION_INTERPOLATION_HPP_
#define OPENFPM_NUMERICS_SRC_INTERPOLATION_INTERPOLATION_HPP_
#include "NN/CellList/MemFast.hpp"
#include "NN/Mem_type/MemFast.hpp"
#include "NN/CellList/CellList.hpp"
#include "Grid/grid_dist_key.hpp"
......@@ -293,7 +293,7 @@ struct calculate_aint<3,vector,np>
*/
template<typename vector, typename grid>
inline size_t getSub(Point<vector::dims,typename vector::stype> & p,
const CellList<vector::dims,typename vector::stype,Mem_fast,shift<vector::dims,typename vector::stype>> & geo_cell,
const CellList<vector::dims,typename vector::stype,Mem_fast<>,shift<vector::dims,typename vector::stype>> & geo_cell,
grid & gd)
{
size_t cell = geo_cell.getCell(p);
......@@ -419,7 +419,7 @@ struct inte_calc_impl
typename vector::stype (& a)[vector::dims][kernel::np],
typename vector::stype (& x)[vector::dims][kernel::np],
size_t (& sz)[vector::dims],
const CellList<vector::dims,typename vector::stype,Mem_fast,shift<vector::dims,typename vector::stype>> & geo_cell,
const CellList<vector::dims,typename vector::stype,Mem_fast<>,shift<vector::dims,typename vector::stype>> & geo_cell,
openfpm::vector<agg_arr<openfpm::math::pow(kernel::np,vector::dims)>> & offsets)
{
auto key_p = it.get();
......@@ -504,7 +504,7 @@ template<typename vector,typename grid, typename kernel>
class interpolate
{
//! Cell list used to convert particles position to sub-domain
CellList<vector::dims,typename vector::stype,Mem_fast,shift<vector::dims,typename vector::stype>> geo_cell;
CellList<vector::dims,typename vector::stype,Mem_fast<>,shift<vector::dims,typename vector::stype>> geo_cell;
/*! Structure to order boxes by volume
*
......
......@@ -8,13 +8,12 @@
#ifndef OPENFPM_NUMERICS_SRC_UTIL_GRID_DIST_TESTING_HPP_
#define OPENFPM_NUMERICS_SRC_UTIL_GRID_DIST_TESTING_HPP_
#include "data_type/scalar.hpp"
#include "Grid/grid_dist_key.hpp"
template<unsigned int dim>
class grid_dist_testing
{
grid_cpu<dim,scalar<size_t>> grid_test;
grid_cpu<dim,aggregate<size_t>> grid_test;
public:
......
......@@ -91,7 +91,7 @@ template<typename T, unsigned int dims, typename stype, typename decomposition>
struct stub_or_real<T,dims,stype,decomposition,false>
{
//! switch type if we are on testing or not
typedef grid_dist_id<dims,stype,scalar<size_t>,decomposition> type;
typedef grid_dist_id<dims,stype,aggregate<size_t>,decomposition> type;
};
#endif /* OPENFPM_NUMERICS_SRC_UTIL_UTIL_NUM_HPP_ */
......@@ -97,7 +97,7 @@ BOOST_AUTO_TEST_CASE( util_num )
ret = std::is_same<stub_or_real<on_test,2,float,CartDecomposition<2,float>>::type, grid_dist_testing<2>>::value ;
BOOST_REQUIRE_EQUAL(ret,true);
ret = std::is_same<stub_or_real<not_on_test,2,float,CartDecomposition<2,float>>::type, grid_dist_id<2,float,scalar<size_t>,CartDecomposition<2,float>> >::value;
ret = std::is_same<stub_or_real<not_on_test,2,float,CartDecomposition<2,float>>::type, grid_dist_id<2,float,aggregate<size_t>,CartDecomposition<2,float>> >::value;
BOOST_REQUIRE_EQUAL(ret,true);
//! [Usage of stub_or_real]
......
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