From 41507ff5e44c108cb0bfe0ff6d3c02c5e242fc9a Mon Sep 17 00:00:00 2001
From: Pietro Incardona <incardon@mpi-cbg.de>
Date: Mon, 24 Jul 2017 14:13:38 +0200
Subject: [PATCH] Fixing HDF5 for CYGWIN

---
 script/install_HDF5.sh | 8 ++++++--
 1 file changed, 6 insertions(+), 2 deletions(-)

diff --git a/script/install_HDF5.sh b/script/install_HDF5.sh
index ef8ec32d..6a73cc54 100755
--- a/script/install_HDF5.sh
+++ b/script/install_HDF5.sh
@@ -39,7 +39,11 @@ fi
 wget http://ppmcore.mpi-cbg.de/upload/hdf5-1.8.16.tar.bz2
 tar -xf hdf5-1.8.16.tar.bz2
 cd hdf5-1.8.16
-CC=mpicc ./configure --with-zlib=$1/ZLIB --enable-parallel --prefix=$1/HDF5
-make -j $2
+
+if [ x"$plaform" != "cygwin" ]; then
+        CC=mpicc ./configure --with-zlib=$1/ZLIB --enable-parallel --prefix=$1/HDF5
+else
+        CC=mpicc ./configure --enable-parallel --prefix=$1/HDF5
+fimake -j $2
 mkdir $1/HDF5
 make install
-- 
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