From 466e3971b56cc2748bd4c166d428af75f9cdb18d Mon Sep 17 00:00:00 2001 From: Pietro Incardona <incardon@mpi-cbg.de> Date: Sat, 19 Sep 2015 15:04:39 +0200 Subject: [PATCH] Try to fix finally wetcluster, the previous 30 commits failed --- build_pdata.sh | 22 +++++++++++----------- openfpm_numerics | 1 + 2 files changed, 12 insertions(+), 11 deletions(-) create mode 160000 openfpm_numerics diff --git a/build_pdata.sh b/build_pdata.sh index 4e4e1720..21b9f033 100644 --- a/build_pdata.sh +++ b/build_pdata.sh @@ -107,27 +107,27 @@ then if [ $? -ne 0 ]; then exit 1 ; fi ## Run on the cluster - bsub -o output_run2.%J -K -n 2 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 2 ./src/pdata" + bsub -o output_run2.%J -K -n 2 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 2 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run3.%J -K -n 3 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 3 ./src/pdata" + bsub -o output_run3.%J -K -n 3 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 3 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run4.%J -K -n 4 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 4 ./src/pdata" + bsub -o output_run4.%J -K -n 4 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 4 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run5.%J -K -n 5 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 5 ./src/pdata" + bsub -o output_run5.%J -K -n 5 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 5 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run6.%J -K -n 6 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 6 ./src/pdata" + bsub -o output_run6.%J -K -n 6 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 6 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run7.%J -K -n 7 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 7 ./src/pdata" + bsub -o output_run7.%J -K -n 7 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 7 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run8.%J -K -n 8 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 8 ./src/pdata" + bsub -o output_run8.%J -K -n 8 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 8 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run9.%J -K -n 9 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 9 ./src/pdata" + bsub -o output_run9.%J -K -n 9 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 9 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run10.%J -K -n 10 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 10 ./src/pdata" + bsub -o output_run10.%J -K -n 10 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 10 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run11.%J -K -n 11 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 11 ./src/pdata" + bsub -o output_run11.%J -K -n 11 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 11 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi - bsub -o output_run12.%J -K -n 12 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 12 ./src/pdata" + bsub -o output_run12.%J -K -n 12 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2; module load boost/1.59.0; mpirun -np 12 ./src/pdata" if [ $? -ne 0 ]; then exit 1 ; fi # bsub -o output_run32.%J -K -n 32 "module load openmpi/1.8.1 ; module load gcc/4.9.2; mpirun -np 32 ./src/vcluster" # if [ $? -ne 0 ]; then exit 1 ; fi diff --git a/openfpm_numerics b/openfpm_numerics new file mode 160000 index 00000000..0c51112a --- /dev/null +++ b/openfpm_numerics @@ -0,0 +1 @@ +Subproject commit 0c51112a6a0808e7209329de9d4639c1e440a815 -- GitLab