#! /bin/bash # Make a directory in /tmp/openfpm_data echo "$PATH" echo "Directory: $1" echo "Machine: $2" mkdir /tmp/openfpm_vcluster mv * .[^.]* /tmp/openfpm_vcluster mv /tmp/openfpm_vcluster openfpm_vcluster mkdir openfpm_vcluster/src/config git clone git@git.mpi-cbg.de:/incardon/openfpm_devices.git openfpm_devices git clone git@git.mpi-cbg.de:/incardon/openfpm_data.git openfpm_data cd "$1/openfpm_vcluster" if [ "$2" == "gin" ]; then echo "Compiling on gin\n" module load gcc/4.9.2 module load openmpi/1.8.1 elif [ "$2" == "wetcluster" ]; then echo "Compiling on wetcluster" ## produce the module path export MODULEPATH="/sw/apps/modules/modulefiles:$MODULEPATH" script="module load gcc/4.9.2\n module load openmpi/1.8.1\n module load boost/1.54.0\n compile_options='--with-boost=/sw/apps/boost/1.54.0/'\n \n sh ./autogen.sh\n sh ./configure \"\$compile_options\" CXX=mpic++\n make\n if [ \"\$?\" = "0" ]; then exit 1 ; fi\n exit(0)\n" echo $script | sed -r 's/\\n/\n/g' > compile_script bsub -o output_compile.%J -K -n 1 -J compile sh ./compile_script elif [ "$2" == "taurus" ]; then echo "Compiling on taurus" echo "$PATH" module load gcc/5.3.0 module load boost/1.60.0 module load openmpi/1.10.2-gnu module unload bullxmpi sh ./autogen.sh sh ./configure --with-boost=/sw/taurus/libraries/boost/1.55.0-gnu4.8 CXX=mpic++ make if [ $? -ne 0 ]; then exit 1 ; fi ### to exclude --exclude=taurusi[6300-6400],taurusi[5400-5500] else source $HOME/.bashrc echo "$PATH" echo "Compiling general" sh ./autogen.sh sh ./configure CXX=mpic++ make if [ $? -ne 0 ]; then exit 1 ; fi fi