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bioinfo
datautils
Commits
3c30004a
Commit
3c30004a
authored
Nov 12, 2015
by
Holger Brandl
Browse files
removed require.auto
parent
a28e690d
Changes
1
Hide whitespace changes
Inline
Side-by-side
R/core_commons.R
View file @
3c30004a
...
...
@@ -21,30 +21,6 @@ options(gsubfn.engine = "R")
########################################################################################################################
## automatic package installation
## @Deprecated use require_auto instead
require_auto
<-
function
(
x
){
warning
(
"require_auto is deprecated. Use require_auto instead"
)
x
<-
as.character
(
substitute
(
x
))
if
(
isTRUE
(
x
%in%
.packages
(
all.available
=
TRUE
)))
{
eval
(
parse
(
text
=
paste
(
"require("
,
x
,
", quietly=T)"
,
sep
=
""
)))
}
else
{
# update.packages(ask=F) # update dependencies, if any.
eval
(
parse
(
text
=
paste
(
"install.packages('"
,
x
,
"')"
,
sep
=
""
)))
}
if
(
isTRUE
(
x
%in%
.packages
(
all.available
=
TRUE
)))
{
eval
(
parse
(
text
=
paste
(
"require("
,
x
,
", quietly=T)"
,
sep
=
""
)))
}
else
{
source
(
"http://bioconductor.org/biocLite.R"
)
# biocLite(character(), ask=FALSE) # update dependencies, if any.
eval
(
parse
(
text
=
paste
(
"biocLite('"
,
x
,
"', ask=FALSE)"
,
sep
=
""
)))
eval
(
parse
(
text
=
paste
(
"require("
,
x
,
", quietly=T)"
,
sep
=
""
)))
}
}
require_auto
<-
function
(
x
){
x
<-
as.character
(
substitute
(
x
))
...
...
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