From a4a2cfc4eb5b43405e4d8783f2b659b14cc81760 Mon Sep 17 00:00:00 2001
From: Holger Brandl <brandl@mpi-cbg.de>
Date: Tue, 14 Oct 2014 13:43:31 +0200
Subject: [PATCH] finished cobinding for first intron
---
R/utils/spinr.sh | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/R/utils/spinr.sh b/R/utils/spinr.sh
index 264fd24..9ca69f6 100644
--- a/R/utils/spinr.sh
+++ b/R/utils/spinr.sh
@@ -30,10 +30,9 @@ spinsnip(){
tmpR=$reportName.R
echo "processing $tmpR..."
- head $tmpR
## http://stackoverflow.com/questions/11454343/pipe-output-to-bash-function
- cat > $tmpR
+ cat | sed 's/#>/#'"'"'/g' > $tmpR
spinr $tmpR
rm $tmpR
--
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