Commit cf4fa28c authored by Holger Brandl's avatar Holger Brandl
Browse files

added eval fallback to mysub

parent 5643f580
......@@ -230,16 +230,17 @@ mysub(){
jobName=$(echo $1| tr ' ' '_'); shift
jobCmd=$1; shift
#todo continue here (maybe refac into independent library?)
# if ! [ -x "$(command -v bsub)" ]; then
# bsub -J $jobName $@ "( $jobCmd ) 2>$jobName.err.log 1>$jobName.out.log"
# else
# eval $jobCmd 2>$jobName.err.log 1>$jobName.out.log
# fi
bsub -J $jobName $@ "( $jobCmd ) 2>$jobName.err.log 1>$jobName.out.log"
## use bsub if available, otherwise fall back to simple eval and ignore other arguments
if [ -n "$(command -v bsub)" ]; then
# echo "submitting job ${jobName}"
bsub -J $jobName $@ "( $jobCmd ) 2>$jobName.err.log 1>$jobName.out.log"
echo "using eval instead of bsub for ${jobName}"
eval $jobCmd 2>$jobName.err.log 1>$jobName.out.log
export -f mysub
#mysub "test" "ls"
#mysub testjob "echo test; echo blabla 1>&2;" -q medium
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