diff --git a/dge_workflow/dge_utils.sh b/dge_workflow/dge_utils.sh index 0b53f0c150189fe59fb4cf0f0cd00685fb25a711..98f00b4b764b4b464d47cc37837df11dead60002 100755 --- a/dge_workflow/dge_utils.sh +++ b/dge_workflow/dge_utils.sh @@ -10,7 +10,7 @@ source <(curl https://raw.githubusercontent.com/holgerbrandl/datautils/v1.12/R/s ## define common binaries ## todo tweak this to work on bioinfo as well -export PATH=/projects/bioinfo/holger/bin/bowtie2-2.2.2:$PATH +export PATH=/projects/bioinfo/holger/bin/bowtie2-2.2.5:$PATH export PATH=/projects/bioinfo/holger/bin/tophat-2.0.13.Linux_x86_64:$PATH export PATH=/home/brandl/bin/cufflinks-2.2.1.Linux_x86_64:$PATH export PATH=/sw/apps/python/current/bin:$PATH