Commit 3fdacd26 authored by Lena Hersemann's avatar Lena Hersemann
Browse files

fixed meanNormCounts for further usage

parent 3701a796
...@@ -549,7 +549,8 @@ meanNormCounts = counts(dds, normalized = TRUE) %>% ...@@ -549,7 +549,8 @@ meanNormCounts = counts(dds, normalized = TRUE) %>%
gather(replicate, norm_count, - ensembl_gene_id) %>% gather(replicate, norm_count, - ensembl_gene_id) %>%
inner_join(exDesign) %>% inner_join(exDesign) %>%
group_by(ensembl_gene_id, condition) %>% group_by(ensembl_gene_id, condition) %>%
summarize(mean_norm_count = mean(norm_count)) summarize(mean_norm_count = mean(norm_count)) %>%
ungroup()
## add base means to diff??ex summary ## add base means to diff??ex summary
......
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