diff --git a/dge_workflow/dge_utils.sh b/dge_workflow/dge_utils.sh index d2048f6aceb206ac544d7d82e2877497936d0497..be49fe1325ddba0671e635edd501582e9da62bb2 100755 --- a/dge_workflow/dge_utils.sh +++ b/dge_workflow/dge_utils.sh @@ -30,6 +30,9 @@ export PATH=$PATH:/projects/bioinfo/scripts/joblist_v0.5-SNAPSHOT #export PATH=/projects/bioinfo/scripts/joblist_v0.5-SNAPSHOT:$PATH #eval "$(jl shortcuts)" +## also add spinr +export PATH=$PATH:/projects/bioinfo/scripts/spinr + # which tophat; which bowtie2; which cuffdiff