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bioinfo
ngs_tools
Commits
6f4c9180
Commit
6f4c9180
authored
Sep 13, 2018
by
Lena Hersemann
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added installation of gffcompare and RNAfold on bioinfo
parent
fc7e9865
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tool_setup.sh
tool_setup.sh
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tool_setup.sh
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6f4c9180
...
...
@@ -330,4 +330,29 @@ rm tip.tar.gz
mkdir
last
mv
last-bc08832db1a1 last/
cd
last/last-bc08832db1a1
make
install
prefix
=
/home/brandl/bin/last/last-bc08832db1a1/
\ No newline at end of file
make
install
prefix
=
/home/brandl/bin/last/last-bc08832db1a1/
########################################################################################################################
### gffcompare
cd
~/bin/
wget http://ccb.jhu.edu/software/stringtie/dl/gffcompare-0.10.4.tar.gz
tar
-xvzf
gffcompare-0.10.4.tar.gz
cd
gffcompare-0.10.4
make
########################################################################################################################
### RNAfold
cd
~/bin/
wget https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/ViennaRNA-2.4.9.tar.gz
tar
-zxf
ViennaRNA-2.4.9.tar.gz
cd
ViennaRNA-2.4.9
./configure
--prefix
=
/home/brandl/bin/ViennaRNA-2.4.9
make
make
install
\ No newline at end of file
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