Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
bioinfo
ngs_tools
Commits
7c0bbde8
Commit
7c0bbde8
authored
Mar 24, 2017
by
Holger Brandl
Browse files
added dependencies section
parent
a3d3d85d
Changes
1
Hide whitespace changes
Inline
Side-by-side
README.md
View file @
7c0bbde8
...
...
@@ -25,6 +25,17 @@ export PATH=${NGS_TOOLS}/dge_workflow:$PATH
Note that the
`NGS_TOOLS`
variable is required because some of the scripts rely on it for to locate helper scripts.
Dependencies
------------
The following tools are required
*
[
jl
](
https://github.com/holgerbrandl/joblist
)
- An hpc task manager
*
samtools
*
R
*
bowtie, STAR,
*
deeptools
VCS model
---------
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment