Commit 7c0bbde8 authored by Holger Brandl's avatar Holger Brandl
Browse files

added dependencies section

parent a3d3d85d
......@@ -25,6 +25,17 @@ export PATH=${NGS_TOOLS}/dge_workflow:$PATH
Note that the `NGS_TOOLS` variable is required because some of the scripts rely on it for to locate helper scripts.
Dependencies
------------
The following tools are required
* [jl](https://github.com/holgerbrandl/joblist) - An hpc task manager
* samtools
* R
* bowtie, STAR,
* deeptools
VCS model
---------
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