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bioinfo
ngs_tools
Commits
80769892
Commit
80769892
authored
Mar 15, 2017
by
Holger Brandl
Browse files
added report links
parent
d9ff7ae6
Changes
1
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Side-by-side
dge_workflow/dge_star_template.sh
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80769892
...
...
@@ -147,8 +147,16 @@ git describe --tags >> ${baseDir}/.used_ngs_tools
## bidirectional sync with project space
## todo define mount path on bioinfo for bidirectional synching
# ~/bin/unison ${baseDir:=error} /net/fileserver-nfs/stornext/snfs3/projects/huttnerlab/Paul/fam72d_transfection_seq/data -fastcheck -times -perms 0 -batch
#remoteProjectDir=/net/fileserver-nfs/stornext/snfs3/projects/ TODO define mount path on bioinfo for bidirectional synching
(
ls
"
${
remoteProjectDir
}
"
"
${
baseDir
}
"
&&
~/bin/unison
${
baseDir
}
${
remoteProjectDir
}
/data
-fastcheck
-times
-perms
0
-batch
)
||
echo
"could not sync data"
## update scripts working copy in project space
#git clone "git@git.mpi-cbg.de:bioinfo/${project}.git" ${remoteProjectDir}/scripts
(
ls
"
${
remoteProjectDir
}
/scripts"
>
/dev/null
&&
cd
${
remoteProjectDir
}
/scripts/
&&
git pull
)
||
echo
"could not sync data"
## also update the git copy of the script
# or use a uni-directional sync
#rsync -avsn --delete ${baseDir} brandl@fileserver:/projects//file/server/path
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