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bioinfo
ngs_tools
Issues
Open
15
Closed
88
All
103
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Title
Priority
Created date
Last updated
Milestone due date
Due date
Popularity
Label priority
Manual
Title
GSEA
#92
· created
Aug 07, 2020
by
domingue
rna_seq
CLOSED
5
updated
Sep 23, 2020
GSEA: add option to use custom gene sets
#93
· created
Sep 09, 2020
by
domingue
rna_seq
CLOSED
1
updated
Sep 09, 2020
gsea: better description
#99
· created
Nov 12, 2020
by
domingue
rna_seq
CLOSED
2
updated
Nov 19, 2020
gsea: bug, hard-coded species
#94
· created
Sep 15, 2020
by
domingue
rna_seq
CLOSED
0
updated
Sep 15, 2020
gsea: bug, in extra sets the first line is being read as header
#95
· created
Sep 15, 2020
by
domingue
rna_seq
CLOSED
0
updated
Sep 15, 2020
gsea: fixing expression explorer
#103
· created
Apr 08, 2021
by
gohr
Bioinformatics
Internal
Non-rechargeable
rna_seq
CLOSED
0
updated
Apr 08, 2021
gsea: generate results for each contrast
#96
· created
Sep 16, 2020
by
domingue
rna_seq
CLOSED
1
updated
Sep 23, 2020
GSEA: improve color code of KEGG pathways
#101
· created
Mar 23, 2021
by
gohr
rna_seq
CLOSED
0
updated
Mar 23, 2021
gsea: improvement of description
#102
· created
Apr 08, 2021
by
gohr
Bioinformatics
Internal
Non-rechargeable
rna_seq
CLOSED
1
updated
Apr 08, 2021
Hardcoded pvalue in plot
#85
· created
Mar 13, 2020
by
domingue
rna_seq
CLOSED
5
updated
Apr 15, 2020
iGenome permissions
#76
· created
Nov 15, 2019
by
domingue
rna_seq
CLOSED
0
updated
Feb 20, 2020
impl better means to access summary and quality statististcs
#18
· created
May 30, 2017
by
brandl
CLOSED
0
updated
Nov 09, 2017
Implement renvs
#73
· created
Sep 16, 2019
by
domingue
mass_spec
rna_seq
CLOSED
2
updated
Feb 20, 2020
Integrate tools to assess gc/3/5 bias, insert size, and capture efficiency
#11
· created
Oct 11, 2016
by
brandl
rna_seq
CLOSED
1
updated
Feb 20, 2020
make sure that exported tables contain double-normalized counts and not just size-normalized ones
#1
· created
Feb 05, 2016
by
brandl
rna_seq
CLOSED
2
updated
Feb 12, 2019
Move workflows to separate repositories
#87
· created
Mar 19, 2020
by
domingue
CLOSED
4
updated
Mar 20, 2020
MS: How is imputation done?
#80
· created
Jul 19, 2019
by
domingue
CLOSED
5
updated
Jan 24, 2020
ms_worflow: bug in heatmap clustering
#69
· created
Aug 27, 2019
by
domingue
mass_spec
CLOSED
1
updated
Aug 28, 2019
MS worflow: improvements
#59
· created
Jul 17, 2019
by
domingue
CLOSED
10
updated
Aug 07, 2019
ms_workflow: add additional quality metrics to the differential abundance analysis output
#36
· created
Feb 06, 2019
by
herseman
mass_spec
CLOSED
3
updated
Mar 08, 2019
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