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bioinfo
ngs_tools
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15
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88
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103
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Title
ms_workflow: Add table with % of contaminants in the most abudant proteins
#68
· created
Aug 26, 2019
by
domingue
mass_spec
CLOSED
0
updated
Aug 26, 2019
ms_worflow: bug in heatmap clustering
#69
· created
Aug 27, 2019
by
domingue
mass_spec
CLOSED
1
updated
Aug 28, 2019
cut delimeter breaks fastqc_summary.R
#70
· created
Sep 09, 2019
by
domingue
rna_seq
CLOSED
0
updated
Sep 09, 2019
Changes in ggplot break boxplot in fastqc_summary.R
#72
· created
Sep 09, 2019
by
domingue
rna_seq
CLOSED
1
updated
Sep 09, 2019
Grep error message crashes the script
#71
· created
Sep 09, 2019
by
domingue
rna_seq
CLOSED
0
updated
Sep 09, 2019
general: Test packrat for keep reproducible R environments
#53
· created
Jun 04, 2019
by
domingue
CLOSED
4
updated
Sep 16, 2019
DEP installation on falcon - nc-config missing
#65
· created
Aug 14, 2019
by
domingue
mass_spec
CLOSED
1
updated
Sep 17, 2019
use http://multiqc.info/ for qc reporting
#10
· created
Jul 29, 2016
by
brandl
rna_seq
CLOSED
1
updated
Nov 18, 2019
dge_workflow: fix lcf help
#74
· created
Oct 22, 2019
by
domingue
rna_seq
CLOSED
0
updated
Dec 02, 2019
general: add multiQC report to fastqc_summary
#54
· created
Jun 05, 2019
by
herseman
CLOSED
4
updated
Dec 02, 2019
try RNA-SeQC to get qc for bam files
#15
· created
May 19, 2017
by
brandl
CLOSED
1
updated
Dec 09, 2019
ms_workflow: handling of contaminations
#37
· created
Feb 08, 2019
by
herseman
mass_spec
CLOSED
1
updated
Dec 10, 2019
ms_workflow: Improvemnts
7 of 9 tasks completed
#28
· created
Dec 07, 2018
by
brandl
mass_spec
CLOSED
3
updated
Dec 10, 2019
conda and bioconductor version
#77
· created
Jan 14, 2020
by
domingue
CLOSED
9
updated
Jan 21, 2020
MS: How is imputation done?
#80
· created
Jul 19, 2019
by
domingue
CLOSED
5
updated
Jan 24, 2020
dge _workflow: analyze duplicates has a broken link to the plot of the model (dupRadar)
#81
· created
Feb 10, 2020
by
domingue
rna_seq
CLOSED
1
updated
Feb 10, 2020
general: track unsynchronized files on the cluster
#82
· created
Feb 17, 2020
by
herseman
CLOSED
1
updated
Feb 17, 2020
ms_workflow: refine reorder information of protein groups
#83
· created
Feb 18, 2020
by
herseman
mass_spec
CLOSED
1
updated
Feb 18, 2020
Integrate tools to assess gc/3/5 bias, insert size, and capture efficiency
#11
· created
Oct 11, 2016
by
brandl
rna_seq
CLOSED
1
updated
Feb 20, 2020
report improvements
#25
· created
Nov 16, 2017
by
brandl
CLOSED
1
updated
Feb 20, 2020
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