Commit 32c4e2bd authored by Holger Brandl's avatar Holger Brandl

changed to use pandoc syntax

parent 8bd7f77f
Cluster
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=======
Use
/projects/bioinfo/scripts/ngs_tools/v1.0
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/projects/bioinfo/scripts/ngs_tools/v1.0
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for stable branch, or
/projects/bioinfo/scripts/ngs_tools/dev
for current master where changes can be added and are pushed occassionally to the origin on git-srv1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/projects/bioinfo/scripts/ngs_tools/dev
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
for current master where changes can be added and are pushed occassionally to
the origin on git-srv1
Bioinfo
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To use the structure from above when working on bioinformatics-srv1 just use
/home/brandl/mnt/mack/bioinfo/scripts/ngs_tools/v1.0
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/home/brandl/mnt/mack/bioinfo/scripts/ngs\_tools/v1.0
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ToDo
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- Finish igv\_track\_range.sh
- Better peak report bioinfo\_templates/chipseq\_workflow/peak\_report.R
- Write igv session xml programmatically including adjusted track; render open
session link ( like
http://localhost:60151/load?file=/Users/brandl/Desktop/my\_session.xml) to
reports above igv-link tables
* Finish igv_track_range.sh
* Better peak report bioinfo_templates/chipseq_workflow/peak_report.R
* Write igv session xml programmatically including adjusted track; render open session link ( like http://localhost:60151/load?file=/Users/brandl/Desktop/my_session.xml) to reports above igv-link tables
* Use proper redmine tracker to evolve the shared codebase
\ No newline at end of file
- Use proper redmine tracker to evolve the shared codebase
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