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bioinfo
ngs_tools
Commits
4ab84de7
Commit
4ab84de7
authored
Sep 09, 2019
by
domingue
1
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Fixes 72
parent
b2d79d31
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1
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common/fastqc_summary.R
common/fastqc_summary.R
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common/fastqc_summary.R
View file @
4ab84de7
...
...
@@ -194,7 +194,7 @@ baseQualities %>%
geom_rect
(
aes
(
xmin
=-
Inf
,
xmax
=
Inf
,
ymin
=
20
,
ymax
=
28
),
data
=
runs
,
alpha
=
0.05
,
fill
=
colors
()[
654
])
+
geom_rect
(
aes
(
xmin
=-
Inf
,
xmax
=
Inf
,
ymin
=
28
,
ymax
=
Inf
),
data
=
runs
,
alpha
=
0.05
,
fill
=
"green"
)
+
geom_boxplot
(
mapping
=
aes
(
x
=
first_base
,
ymin
=
X10th.Percentile
,
lower
=
Lower.Quartile
,
middle
=
Median
,
upper
=
Upper.Quartile
,
ymax
=
X90th.Percentile
),
mapping
=
aes
(
x
=
first_base
,
ymin
=
X10th.Percentile
,
lower
=
Lower.Quartile
,
middle
=
Median
,
upper
=
Upper.Quartile
,
ymax
=
X90th.Percentile
,
group
=
first_base
),
stat
=
"identity"
)
+
facet_wrap
(
~
run
,
ncol
=
3
)
+
...
...
domingue
@domingue
mentioned in issue
#72 (closed)
·
Sep 09, 2019
mentioned in issue
#72 (closed)
mentioned in issue #72
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