Commit 719fe937 authored by Lena Hersemann's avatar Lena Hersemann

change "fetch the data" section to prevent disclosure of login details

parent 6747f0ad
......@@ -47,7 +47,9 @@ export PATH=${NGS_TOOLS}/dge_workflow:$PATH
mcdir ${PRJ_DATA}/originals
wget -nc --user="USER" --password="PW" -r --no-directories --no-check-certificate -A "*fastq.gz" https:/projects.biotec.tu-dresden.de/ngs-filesharing/martaf/
source /net/fileserver-nfs/stornext/snfs4/projects/bioinformatics/tools/bioinfo_resources/bioinfo_secrets.sh
#TODO: complement the https://projects.biotec.tu-dresden.de/ngs-filesharing/ URL by user
wget -nc --user="USER_variable" --password="PW_variable" -r --no-directories --no-check-certificate -A "*fastq.gz" https://projects.biotec.tu-dresden.de/ngs-filesharing/
mailme "${PRJ_NAME}: fastq download done"
......
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