Commit 72893bc8 authored by Holger Brandl's avatar Holger Brandl

added issue #11 comment; refac of diffex workflow to current R

parent 70d319bc
......@@ -156,6 +156,10 @@ jl submit --jl .bamcorrelate -w 10:00 -t 4 -n "${project}__bamcorrelate" "$bcCmd
export -f dge_bam_correlate
## see https://git.mpi-cbg.de/bioinfo/ngs_tools/issues/11
## Integrate tools to assess gc/3/5 bias, insert size, and capture efficiency (see "Multi-perspective quality control of Illumina RNA sequencing data analysis")
## e.g. using http://deeptools.readthedocs.io/en/latest/content/tools/computeGCBias.html?highlight=bias
dge_bigwig(){
......
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