Commit a53c00e2 authored by Holger Brandl's avatar Holger Brandl

added contig id padding for easier grepping

parent db307f08
......@@ -69,17 +69,11 @@ chmod -R -w ../$newVersion
 
ToDo
ToDos
====
- mcdir sourced in?
- use STAR for mapping
- split cuffdiff report into individual tools
- Use featureCounts and DesSeq2 for differential expression analysisf
- Finish igv\_track\_range.sh
- Better peak report bioinfo\_templates/chipseq\_workflow/peak\_report.R
......@@ -90,3 +84,7 @@ ToDo
reports above igv-link tables
- Use proper redmine tracker to evolve the shared codebase
- Learn from http://www.bioconductor.org/help/workflows/rnaseqGene/
* distance matrix using Poisson Distance
* pca variance proportions on axis
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