Commit aec15c2a authored by Naharajan's avatar Naharajan

adding devtools::session_info()

parent ca9e1e44
......@@ -27,7 +27,7 @@ require_auto(DT)
require_auto(clusterProfiler)
devtools::session_info()
## to fix child support issue with knitr, see also
## http://stackoverflow.com/questions/20030523/knitr-nested-child-documents
......@@ -127,7 +127,7 @@ annoDb <- guess_anno_db(geneLists$ensembl_gene_id) # e.g. "org.Hs.eg.db"
#idType("org.Hs.eg.db")
## convert to entrez gene ids
devtools::session_info()
glMappedRaw <- clusterProfiler::bitr(geneLists$ensembl_gene_id, fromType="ENSEMBL", toType="ENTREZID", annoDb=annoDb) %>%
set_names("ensembl_gene_id", "entrez_gene_id") %>% right_join(geneLists)
......
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