Commit f26f0d50 authored by brandl's avatar brandl

added hints about automatic testing

parent 94af8065
......@@ -12,4 +12,10 @@ source $NGS_TOOLS/dge_workflow/dge_utils.sh
star_align.kts /local2/igenomes/Mus_Musculus/Ensembl/GRCm38 ~/mouse_test.fastq.gz
mailme "star test done"
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# todo finish
#if [[ ! -f mouse_test.bam ]]; then echo no bam file; exit 1; done
#set -e
#diff mouse_test.bam ref.bam
## next add to test-suite and run with assert.h , see https://github.com/holgerbrandl/kscript/blob/master/test/test_suite.sh
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