1. 01 Jul, 2020 1 commit
  2. 30 Jun, 2020 1 commit
  3. 26 Jun, 2020 2 commits
  4. 25 Jun, 2020 1 commit
  5. 24 Jun, 2020 1 commit
    • domingue's avatar
      New features added · 006d591f
      domingue authored
      - added min_count argument to avoid overplotting
      - added correlation plots
      006d591f
  6. 03 Jun, 2020 1 commit
  7. 27 May, 2020 2 commits
  8. 13 May, 2020 2 commits
  9. 09 Apr, 2020 2 commits
  10. 02 Apr, 2020 1 commit
  11. 23 Mar, 2020 1 commit
  12. 20 Mar, 2020 2 commits
  13. 19 Mar, 2020 1 commit
  14. 18 Mar, 2020 2 commits
  15. 17 Mar, 2020 3 commits
  16. 12 Mar, 2020 1 commit
  17. 09 Mar, 2020 1 commit
  18. 25 Feb, 2020 1 commit
  19. 19 Feb, 2020 5 commits
    • domingue's avatar
      Removed prefix from intensity table columns · fb083c61
      domingue authored
      fb083c61
    • domingue's avatar
      Merge branch 'ms-replicates-qc-test' · ca12ed6e
      domingue authored
      Major changes: technical replicate section was modified to work with the sample file columns.
      
      Added:
      - new input arguments
      - tests to validate the technical replicates inputs
      - new output for the averaged table of intensities (mean with na.rm=FALSE or TRUE)
      
      Changed:
      - arguments description from label to replicate
      - minor changes to code syntax
      
      Tests:
      - tested with locally with R3.6 and remotely with R3.5.1
      - changing other unrelated flags
      - Two datasets, one with and one without technical replicates
      ca12ed6e
    • domingue's avatar
      Minor typo in output file name · d71ef805
      domingue authored
      d71ef805
    • Lena Hersemann's avatar
      added argument to use majority_protein_ids instead or protein_ids as... · dcd0c443
      Lena Hersemann authored
      added argument to use majority_protein_ids instead or protein_ids as identifiers for the intensities matrix; added meaningful error message in case any redundant identifiers are found
      dcd0c443
    • domingue's avatar
      Major changes: technical replicate section was modified to work with the sample file columns. · a1ea9018
      domingue authored
      Added:
      - new input arguments
      - tests to validate the technical replicates inputs
      - new output for the averaged table of intensities (mean with na.rm=FALSE or TRUE)
      
      Changed:
      - arguments description from label to replicate
      - minor changes to code syntax
      
      Tests:
      - tested with locally with R3.6 and remotely with R3.5.1
      - changing other unrelated flags
      - Two datasets, one with and one without technical replicates
      a1ea9018
  20. 18 Feb, 2020 2 commits
  21. 17 Feb, 2020 2 commits
  22. 10 Feb, 2020 3 commits
  23. 28 Jan, 2020 2 commits