Skip to content

Changes in Schema for Condensates

Changes in Condensates:

  1. canonical_id instead of unique_name is now the unique identifier
  2. protein_evidence_map is a new attribute that contains a list of evidence for all proteins in the condensate --> Use the evidence for "Evidence Stars" in the proteins table on the condensate page
  3. synonyms is a new attribute for a list of other names of the condensate. So, frontend could have a new label --> Add a label in condensate detail page Also Known As and show the list(after decorating the name: replace the hyphen with space, and capitalise the words; eg: "germ-granule" becomes "Germ Granule")
{
            "canonical_id": "p-granule__9606",
            "name": "P Granule",
            "protein_evidence_map": {
                "O00571": [
                    "grey__reviewed_data"
                ],
                "Q9NQI0": [
                    "hungarian"
                ]
            },
            "proteins": [
                "Q9NQI0",
                "O00571"
            ],
            "species_name": "Homo sapiens",
            "species_tax_id": "9606",
            "synonyms": [
                "p-granule",
                "germ-plasm/polar-granule",
                "germ-granule"
            ]
}