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Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

PPM client for diffusion on curved surfaces

Region Competition algorithm implemented as an ITK filter (C++).

Library for producing and processing on the Adaptive Particle Representation (APR)