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Segmentation of the basal cell-matrix contact sites on laminin structure
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Small scripts and bits for data processing interoperability with the cluster
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Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"
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Scientific Computing / Schuhmacher et al 2020. Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities.
BSD 3-Clause "New" or "Revised" LicenseLive cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities
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Scenery - Virtual Reality and Augmented Reality framework
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This software package implements the identification of robust topological defects.
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Region Competition algorithm implemented as an ITK filter (C++).
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Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.
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pSSAlib: Stochastic chemical network and reaction-diffusion simulation
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