Explore projects
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Backend APIs (Flask) exposing data from database in RESTful format
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Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"
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PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.
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Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)
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A collection of tools to process and manipulate high-throughput sequencing data
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Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files
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Exploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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3day Image analysis course given externally in 2020-12.
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Complementary information concerning the article "Mutations in the Drosophila splicing regulator Prp31 as a model for Retinitis pigmentosa 11"
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