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Backend APIs (Flask) exposing data from database in RESTful format

Project to quantify and measure orientation of network branches in regards to Ch iMap

private repo with testing jupyter notebooks

Code repository for various misc plk scripts.

A collection of tools to process and manipulate high-throughput sequencing data

Supplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"

openfpm_pdata

New analyses for the "Navigating Uncertainty in Encoded Decision-Space" project. Analysis for both "Fruit Task" and "Hexagons Task."

Similarity/Homology Assessment by Relating K-mers

This is a code-repository for the image-, sequencing and data-analysis performed for the manuscript: Integrated Molecular-Phenotypic Profiling Reveals Tuneable Modulators of Morphological Variation in Stembryos" authored by: Alba Villaronga Luque et al.

useful functionality for image-, data-analysis and classification of stembryos

Documentations for CD-CODE project

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.

Python package of the deTEL translation error detection pipeline from mass-spectrometry data