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Similarity/Homology Assessment by Relating K-mers

Web frontend (VueJs) and CMS (Strapi)

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files

Documentations for CD-CODE project

A collection of tools to process and manipulate high-throughput sequencing data

openfpm_pdata

Backend APIs (Flask) exposing data from database in RESTful format

Plugin to fit and unwrap ellipsoid surfaces

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

Analysis of actomyosin dynamics at local and tissue scales in cultured Drosophila egg chambers. Ivana Viktorinová, Robert Haase, Tobias Pietzsch, Ian Henry and Pavel Tomancak