Scientific Computing issueshttps://git.mpi-cbg.de/groups/scicomp/-/issues2019-09-02T09:30:58Zhttps://git.mpi-cbg.de/scicomp/bioinfo_team/corescf/-/issues/6Add tests to functions2019-09-02T09:30:58ZdomingueAdd tests to functionsThis will take some time and we need to define which tests.This will take some time and we need to define which tests.dominguedominguehttps://git.mpi-cbg.de/scicomp/bioinfo_team/corescf/-/issues/15Create internal package wepage2020-01-09T15:39:51ZdomingueCreate internal package wepageUsing `pkgdown`. See for example https://jdblischak.github.io/workflowr/
The advantage is that it has an easy overview of all the function - which might not even now exist.
It has to be internal, so I am not sure if that works in gitlab.Using `pkgdown`. See for example https://jdblischak.github.io/workflowr/
The advantage is that it has an easy overview of all the function - which might not even now exist.
It has to be internal, so I am not sure if that works in gitlab.dominguedominguehttps://git.mpi-cbg.de/scicomp/bioinfo_team/corescf/-/issues/19test in pipelines2020-10-07T14:53:32Zdominguetest in pipelinesPipelines to test:
- [x] dge, differential expression
- [x] dge, cp_enrichment
- [x] dge, fgsea
- [x] ms, pre-processing
- [x] ms, dep_tmp
- [ ] sc, QC
- [ ] sc, clustering
- [ ] sc, shinyPipelines to test:
- [x] dge, differential expression
- [x] dge, cp_enrichment
- [x] dge, fgsea
- [x] ms, pre-processing
- [x] ms, dep_tmp
- [ ] sc, QC
- [ ] sc, clustering
- [ ] sc, shinydominguedomingue