tothpetroczylab issueshttps://git.mpi-cbg.de/groups/tothpetroczylab/-/issues2024-03-25T18:52:07Zhttps://git.mpi-cbg.de/tothpetroczylab/shark/-/issues/2Setup "pip"-installable on PyPI2024-03-25T18:52:07ZSoumyadeep GhoshSetup "pip"-installable on PyPISoumyadeep GhoshSoumyadeep Ghoshhttps://git.mpi-cbg.de/tothpetroczylab/detelpy/-/issues/1rTEL does not support relative input paths2024-03-15T11:42:46ZscheremerTEL does not support relative input pathsAfter some more testing yesterday, I figured out that rTEL does not support relative input paths (even though we state that in the README), because we do change the working directory as part of the workflow to cater the needs of Philosop...After some more testing yesterday, I figured out that rTEL does not support relative input paths (even though we state that in the README), because we do change the working directory as part of the workflow to cater the needs of Philosopher. This PR hopefully solves the problem.
FYI, I have tested eTEL and mTEL modules and they both accept absolute and relative input paths.
cc: @landerer @tothpet @moonscheremescheremehttps://git.mpi-cbg.de/tothpetroczylab/picnic/-/issues/2Error message while searching with 3 characters2024-01-18T12:36:19ZAnna HadarovichError message while searching with 3 charactersError message pops up while searching the first time with 3 characters
![Screenshot_2024-01-10_at_11.59.33](/uploads/cf3a8083aaa524a50fb502a7fc5aa439/Screenshot_2024-01-10_at_11.59.33.png)Error message pops up while searching the first time with 3 characters
![Screenshot_2024-01-10_at_11.59.33](/uploads/cf3a8083aaa524a50fb502a7fc5aa439/Screenshot_2024-01-10_at_11.59.33.png)moonmoonhttps://git.mpi-cbg.de/tothpetroczylab/picnic/-/issues/1PICNIC go should exit and return error message when no GO annotation can be f...2023-12-14T10:43:36ZscheremePICNIC go should exit and return error message when no GO annotation can be found for a particular protein sequenceWe have noticed that PICNIC go returns a prediction score for protein with no GO annotations, like for instance for UniProt entry Q96AT1.
This needs to be fixed and PICNIC should exit and return an error message saying to use the default...We have noticed that PICNIC go returns a prediction score for protein with no GO annotations, like for instance for UniProt entry Q96AT1.
This needs to be fixed and PICNIC should exit and return an error message saying to use the default PICNIC mode, which does not consider GO annotations.scheremeschereme2023-12-18