From 07426b6b89c5a451871dd6e9b2cb4a5ea23dcb51 Mon Sep 17 00:00:00 2001
From: Lars Hubatsch <hubatsch@pks.mpg.de>
Date: Tue, 31 Aug 2021 09:17:05 +0200
Subject: [PATCH] Legend and plot for scaffold-substrate system
(Hammerhead/Ribozyme).
---
@Ternary_model/plot_sim.m | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/@Ternary_model/plot_sim.m b/@Ternary_model/plot_sim.m
index 88e8109..6b5e62a 100644
--- a/@Ternary_model/plot_sim.m
+++ b/@Ternary_model/plot_sim.m
@@ -16,6 +16,7 @@ if strcmp(mode, 'mov')
for i = 1:nth:length(T.t)
cla;
axis([0, T.system_size, 0, max(T.sol(:))]);
+ xlim([0, 10]);
ax = gca; ax.FontSize = 12;
xlabel('position'); ylabel('probability [not normalized]');
plot(T.x, T.phi_tot(T.x, T.a, T.b, T.e, T.u0, T.t(i)*T.v),...
@@ -24,10 +25,12 @@ if strcmp(mode, 'mov')
plot(T.x, T.sol(i, :), 'LineWidth', 2);
elseif length(size(T.sol))==3
plot(T.x, T.sol(i, :, 1), 'LineWidth', 2, 'Color', color);
- plot(T.x, T.sol(i, :, 2), 'LineWidth', 2, 'Color', 'k');
+ plot(T.x, T.sol(i, :, 2), 'LineWidth', 2, 'Color', 'g');
+ legend('Droplet scaffold', 'Substrate', 'Cleaved product');
end
text(abs(-T.a+2), 0.7, num2str(T.t(i)));
- shg; pause();
+ shg;
+ pause();
% print([num2str(i),'.png'],'-dpng')
end
elseif strcmp(mode, 'plot')
--
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