only slipt on starting >

1ce17479 · mirandaa · 16ef78d7 · 1ce17479
Commit 1ce17479 authored Nov 23, 2018 by mirandaa
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Showing with 1 addition and 3 deletions

main.py main.py +1 -3

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--- a/main.py
+++ b/main.py
@@ -3,7 +3,6 @@ Created on 08.11.2018

 @author: mirandaa
 '''
-import re

 if __name__ == '__main__': 
    print('''program to get the fasta files from a list of accession numbers
@@ -23,8 +22,7 @@ good luck!
    with open('protg_uniprot-mouse20170704.fasta', 'r') as fasta_file:
        fasta = fasta_file.read()
    
-    #parts = fasta.split('>')
-    parts =re.split('^>', fasta)
+    parts = fasta.split('\n>')
    partsDict = {}
    for part in parts:
        part1 = part.split('\n')[0]