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Sbalzarini Lab
LibAPR
Commits
b4c8d028
Commit
b4c8d028
authored
Sep 21, 2018
by
cheesema
Browse files
Updated version to release 1.1
parent
18a1b8f3
Changes
2
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CMakeLists.txt
View file @
b4c8d028
...
@@ -40,8 +40,8 @@ list(APPEND CMAKE_MODULE_PATH
...
@@ -40,8 +40,8 @@ list(APPEND CMAKE_MODULE_PATH
# Generate configuration file
# Generate configuration file
###############################################################################
###############################################################################
set
(
APR_VERSION_MAJOR 1
)
set
(
APR_VERSION_MAJOR 1
)
set
(
APR_VERSION_MINOR
0
)
set
(
APR_VERSION_MINOR
1
)
set
(
APR_VERSION_PATCH
2
)
set
(
APR_VERSION_PATCH
0
)
set
(
APR_VERSION_STRING
${
APR_VERSION_MAJOR
}
.
${
APR_VERSION_MINOR
}
.
${
APR_VERSION_PATCH
}
)
set
(
APR_VERSION_STRING
${
APR_VERSION_MAJOR
}
.
${
APR_VERSION_MINOR
}
.
${
APR_VERSION_PATCH
}
)
execute_process
(
COMMAND git rev-parse HEAD
execute_process
(
COMMAND git rev-parse HEAD
WORKING_DIRECTORY
${
PROJECT_SOURCE_DIR
}
WORKING_DIRECTORY
${
PROJECT_SOURCE_DIR
}
...
...
README.md
View file @
b4c8d028
...
@@ -131,6 +131,10 @@ Example usage of the available functionality:
...
@@ -131,6 +131,10 @@ Example usage of the available functionality:
Note that you may have to manually change the
`sys.path.insert()`
statements before
`import pyApr`
in these scripts to insert your build folder.
Note that you may have to manually change the
`sys.path.insert()`
statements before
`import pyApr`
in these scripts to insert your build folder.
## Java wrappers
Basic Java wrappers can be found at
[
LibAPR-java-wrapper
](
https://github.com/krzysg/LibAPR-java-wrapper
)
## Coming soon
## Coming soon
*
more examples for APR-based filtering and segmentation
*
more examples for APR-based filtering and segmentation
...
@@ -138,6 +142,8 @@ Note that you may have to manually change the `sys.path.insert()` statements bef
...
@@ -138,6 +142,8 @@ Note that you may have to manually change the `sys.path.insert()` statements bef
*
support for loading the APR in
[
Fiji
](
https://fiji.sc
)
, including
[
scenery-based
](
https://github.com/scenerygraphics/scenery
)
3D rendering
*
support for loading the APR in
[
Fiji
](
https://fiji.sc
)
, including
[
scenery-based
](
https://github.com/scenerygraphics/scenery
)
3D rendering
*
improved java wrapper support
*
improved java wrapper support
*
CUDA GPU-accelerated APR generation and processing
*
CUDA GPU-accelerated APR generation and processing
*
Block based decomposition for extremely large images.
*
Time series support.
## Contact us
## Contact us
...
@@ -149,4 +155,4 @@ If anything is not working as you think it should, or would like it to, please g
...
@@ -149,4 +155,4 @@ If anything is not working as you think it should, or would like it to, please g
If you use this library in an academic context, please cite the following paper:
If you use this library in an academic context, please cite the following paper:
*
Cheeseman, Günther, Susik, Gonciarz, Sbalzarini: _Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images_ (bioRxiv 2018) https://www.biorxiv.org/content/early/2018/0
2/09
/263061
*
Cheeseman, Günther, Susik, Gonciarz, Sbalzarini: _Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images_ (bioRxiv 2018) https://www.biorxiv.org/content/early/2018/0
6/28
/263061
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