From 863d65e6f3e7c9af1e979a78d2eae8aed332a81f Mon Sep 17 00:00:00 2001
From: Pietro Incardona <incardon@mpi-cbg.de>
Date: Thu, 17 Aug 2017 02:40:35 +0200
Subject: [PATCH] Fixing io in SE_CLASS3
---
src/CSVWriter/CSVWriter_unit_tests.hpp | 4 ++
src/RawReader/RawReader_unit_tests.hpp | 5 ++
src/VTKWriter/VTKWriter_unit_tests.hpp | 66 +++++++++++++++++++++++---
src/util/GBoxes.hpp | 10 ++++
4 files changed, 78 insertions(+), 7 deletions(-)
diff --git a/src/CSVWriter/CSVWriter_unit_tests.hpp b/src/CSVWriter/CSVWriter_unit_tests.hpp
index bacfe6c..4716526 100644
--- a/src/CSVWriter/CSVWriter_unit_tests.hpp
+++ b/src/CSVWriter/CSVWriter_unit_tests.hpp
@@ -58,8 +58,12 @@ BOOST_AUTO_TEST_CASE( csv_writer_particles )
// Write the CSV
csv_writer.write("csv_out_unk.csv",v_pos,v_prp);
+ // In case of SE_CLASS3 enabled the number of properties change
+
+#ifndef SE_CLASS3
bool test = compare("csv_out_unk.csv","test_data/csv_out_unk_test.csv");
BOOST_REQUIRE_EQUAL(true,test);
+#endif
}
}
diff --git a/src/RawReader/RawReader_unit_tests.hpp b/src/RawReader/RawReader_unit_tests.hpp
index 5ad59f0..e095cc6 100644
--- a/src/RawReader/RawReader_unit_tests.hpp
+++ b/src/RawReader/RawReader_unit_tests.hpp
@@ -23,6 +23,9 @@ BOOST_AUTO_TEST_CASE( raw_reader_read_test )
grid_cpu<3,aggregate<float,float[3]>> read_bin_test;
GridRawReader<3,aggregate<float,float[3]>,int> rr;
+
+#ifndef SE_CLASS3
+
rr.read("test_data/raw_read_sv_test.bin",read_bin_test,FORTRAN_STYLE | STRUCT_OF_ARRAY,12);
auto it = read_bin_test.getIterator();
@@ -39,6 +42,8 @@ BOOST_AUTO_TEST_CASE( raw_reader_read_test )
++it;
}
+
+#endif
}
diff --git a/src/VTKWriter/VTKWriter_unit_tests.hpp b/src/VTKWriter/VTKWriter_unit_tests.hpp
index 51172ce..2406c13 100644
--- a/src/VTKWriter/VTKWriter_unit_tests.hpp
+++ b/src/VTKWriter/VTKWriter_unit_tests.hpp
@@ -15,10 +15,9 @@
BOOST_AUTO_TEST_SUITE( vtk_writer_test )
-/* \brief Sub-domain vertex graph node
+/*! \brief Sub-domain vertex graph node
*
*/
-
struct vertex
{
//! The node contain 3 unsigned long integer for communication computation memory and id
@@ -35,13 +34,22 @@ struct vertex
//! The data
type data;
+
+ //! x
static const unsigned int x = 0;
+ //! y
static const unsigned int y = 1;
+ //! z
static const unsigned int z = 2;
+ //! property 1
static const unsigned int prp1 = 3;
+ //! property 2
static const unsigned int prp2 = 4;
+ //! property 3
static const unsigned int prp3 = 5;
+ //! property 4
static const unsigned int prp4 = 6;
+ //! property 5
static const unsigned int prp5 = 7;
//! total number of properties boost::fusion::vector
@@ -58,7 +66,9 @@ struct vertex
/*! \brief Initialize the VTKVertex
*
- * \param
+ * \param x coordinate x
+ * \param y coordinate y
+ * \param z coordinate z
*
*/
vertex(float x, float y, float z)
@@ -107,7 +117,9 @@ struct vertex2
/*! \brief Initialize the VTKVertex
*
- * \param
+ * \param x coordinate x
+ * \param y coordinate y
+ * \param z coordinate z
*
*/
vertex2(float x, float y, float z)
@@ -671,9 +683,13 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_grids)
openfpm::vector<std::string> prp_names;
vtk_g.write("vtk_grids.vtk",prp_names);
+#ifndef SE_CLASS3
+
// Check that match
bool test = compare("vtk_grids.vtk","test_data/vtk_grids_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+
+#endif
}
{
@@ -826,9 +842,14 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_grids)
openfpm::vector<std::string> prp_names;
vtk_g.write("vtk_grids_unk.vtk",prp_names);
+#ifndef SE_CLASS3
+
// Check that match
bool test = compare("vtk_grids_unk.vtk","test_data/vtk_grids_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+
+#endif
+
}
// Try
@@ -924,10 +945,15 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set )
openfpm::vector<std::string> prp_names;
vtk_v.write("vtk_points.vtk",prp_names);
+#ifndef SE_CLASS3
+
+ bool test = true;
+
// Check that match
- bool test = compare("vtk_points.vtk","test_data/vtk_points_test.vtk");
+ test = compare("vtk_points.vtk","test_data/vtk_points_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
// Create a writer and write
VTKWriter<boost::mpl::pair<openfpm::vector<Point<3,double>>,openfpm::vector<aggregate<float,Point<3,float>>>>,VECTOR_POINTS> vtk_v2;
@@ -935,10 +961,14 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set )
vtk_v2.write("vtk_points_pp.vtk",prp_names);
+#ifndef SE_CLASS3
+
// Check that match
test = compare("vtk_points_pp.vtk","test_data/vtk_points_pp_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
+
}
}
@@ -983,10 +1013,14 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set_properties )
openfpm::vector<std::string> prp_names({"scalar","vector"});
vtk_v.write("vtk_points_with_prp_names.vtk",prp_names);
+#ifndef SE_CLASS3
+
// Check that match
bool test = compare("vtk_points_with_prp_names.vtk","test_data/vtk_points_with_prp_names_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
+
}
}
@@ -1066,23 +1100,32 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set_binary )
vtk_v.write("vtk_points_bin.vtk",prp_names,"vtk output",file_type::BINARY);
vtk_v.write("vtk_points_bin2.vtk",prp_names,"vtk output",file_type::BINARY);
+#ifndef SE_CLASS3
+
+ bool test = true;
// Check that match
- bool test = compare("vtk_points_bin.vtk","test_data/vtk_points_bin_test.vtk");
+ test = compare("vtk_points_bin.vtk","test_data/vtk_points_bin_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
test = compare("vtk_points_bin2.vtk","test_data/vtk_points_bin_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
+
// Create a writer and write
VTKWriter<boost::mpl::pair<openfpm::vector<Point<3,double>>,openfpm::vector<aggregate<float,Point<3,float>>>>,VECTOR_POINTS> vtk_v2;
vtk_v2.add(v1ps,v4pp,75);
vtk_v2.write("vtk_points_pp_bin.vtk",prp_names,"vtk output",file_type::BINARY);
+#ifndef SE_CLASS3
+
// Check that match
test = compare("vtk_points_pp_bin.vtk","test_data/vtk_points_pp_bin_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
+
}
@@ -1174,10 +1217,15 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set_binary )
vtk_v.write("vtk_points_2d_bin.vtk",stub,"vtk output",file_type::BINARY);
+#ifndef SE_CLASS3
+
+ bool test = true;
+
// Check that match
- bool test = compare("vtk_points_2d_bin.vtk","test_data/vtk_points_2d_bin_test.vtk");
+ test = compare("vtk_points_2d_bin.vtk","test_data/vtk_points_2d_bin_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+#endif
// Create a writer and write
VTKWriter<boost::mpl::pair<openfpm::vector<Point<2,double>>,openfpm::vector<aggregate<float[3],double[2]>>>,VECTOR_POINTS> vtk_v2;
@@ -1185,9 +1233,13 @@ BOOST_AUTO_TEST_CASE( vtk_writer_use_point_set_binary )
vtk_v2.write("vtk_points_2d_pp_bin.vtk",stub,"vtk output",file_type::BINARY);
+#ifndef SE_CLASS3
+
// Check that match
test = compare("vtk_points_2d_pp_bin.vtk","test_data/vtk_points_2d_pp_bin_test.vtk");
BOOST_REQUIRE_EQUAL(test,true);
+
+#endif
}
}
diff --git a/src/util/GBoxes.hpp b/src/util/GBoxes.hpp
index b63033b..4f4304c 100644
--- a/src/util/GBoxes.hpp
+++ b/src/util/GBoxes.hpp
@@ -44,6 +44,16 @@ struct GBoxes
Box<dim,long int> Dbox;
//! origin of GDbox in global grid coordinates
Point<dim,long int> origin;
+
+ /*! \brief Indicate that this structure has no pointers inside
+ *
+ * \return true
+ *
+ */
+ static bool noPointers()
+ {
+ return true;
+ }
};
--
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