#! /bin/bash source script/discover_os discover_os # check if the directory $1/HDF5 exist if [ -d "$1/HDF5" -a -f "$1/HDF5/include/hdf5.h" ]; then echo "HDF5 is already installed" exit 0 fi if [ ! -d "$1/ZLIB" -a x"$platform" != x"cygwin" ]; then rm zlib-1.2.11.tar.gz rm -rf zlib-1.2.11 wget https://zlib.net/zlib-1.2.11.tar.gz if [ $? -ne 0 ]; then echo -e "\033[91;5;1m FAILED! Installation requires an Internet connection \033[0m" exit 1 fi tar -xf zlib-1.2.11.tar.gz cd zlib-1.2.11 CC=mpicc ./configure --prefix=$1/ZLIB make -j $2 cd .. if [ $? -eq 0 ]; then make check install else echo -e "\033[91;5;1m ZLIB Installation FAILED \033[0m" exit 1 fi else echo "ZLIB is already installed" fi ### 1.8.19 does not compile on CYGWIN wget http://ppmcore.mpi-cbg.de/upload/hdf5-1.10.6.tar.gz tar -xf hdf5-1.10.6.tar.gz cd hdf5-1.10.6 if [ x"$platform" != x"cygwin" ]; then CC=mpicc ./configure --with-zlib=$1/ZLIB --enable-parallel --prefix=$1/HDF5 make -j $2 else CC=mpicc ./configure --enable-parallel --prefix=$1/HDF5 make CFLAGS=-D_POSIX_C_SOURCE -j $2 fi mkdir $1/HDF5 make install if [ $? -ne 0 ]; then echo "HDF5 error installing" exit 0 fi echo 2 > $1/HDF5/version