diff --git a/configure.ac b/configure.ac index 45305737cf35b7cb75f16002efc55dff7d520c2c..91242b72b446585360eba0f5490cbadd9af2a9e2 100644 --- a/configure.ac +++ b/configure.ac @@ -147,6 +147,9 @@ AC_CHECK_LIB(quadmath, sinq, [AC_DEFINE(HAVE_LIBQUADMATH,[],[Have quad math lib] LIBQUADMATH=" -lquadmath " ], []) +AC_SUBST(OPENMP_CFLAGS) +AC_SUBST(OPENMP_LDFLAGS) + ######## ## Enable scan coverty diff --git a/script/install_PETSC.sh b/script/install_PETSC.sh index a420fc28b3d5bcc8f176313af06e637d0c266b0a..a3bbfb8f436034836b63a5243f7324495c17c842 100755 --- a/script/install_PETSC.sh +++ b/script/install_PETSC.sh @@ -109,9 +109,9 @@ if [ ! -d "$1/TRILINOS" ]; then petsc_openmp="" if [ x"$dgc_compiler" == x"clang++" ]; then conf_trl_openmp="-D Trilinos_ENABLE_OpenMP=OFF" - petsc_openmp="--with-openmp=yes" else conf_trl_openmp="-D Trilinos_ENABLE_OpenMP=ON" +# petsc_openmp="--with-openmp=yes" fi cmake -D CMAKE_INSTALL_PREFIX:PATH=$1/TRILINOS -D CMAKE_BUILD_TYPE=RELEASE $conf_trl_openmp -D Trilinos_ENABLE_TESTS=OFF -D Trilinos_ENABLE_ALL_PACKAGES=ON $configure_trilinos_options ../. diff --git a/src/Makefile.am b/src/Makefile.am index 66860062a9e120c72870860985bc5207ca8d2182..fff4127b0a3b696e5dc7eed7d653e86ddf9b38b1 100644 --- a/src/Makefile.am +++ b/src/Makefile.am @@ -1,8 +1,8 @@ -LINKLIBS = $(LIBHILBERT_LIB) $(METIS_LIB) $(PTHREAD_LIBS) $(OPT_LIBS) $(BOOST_LDFLAGS) $(BOOST_IOSTREAMS_LIB) $(CUDA_LIBS) $(PETSC_LIB) $(HDF5_LDFLAGS) $(HDF5_LIBS) $(PARMETIS_LIB) $(BOOST_UNIT_TEST_FRAMEWORK_LIB) $(BOOST_CHRONO_LIB) $(BOOST_TIMER_LIB) $(BOOST_SYSTEM_LIB) +LINKLIBS = $(OPENMP_LDFLAGS) $(LIBHILBERT_LIB) $(METIS_LIB) $(PTHREAD_LIBS) $(OPT_LIBS) $(BOOST_LDFLAGS) $(BOOST_IOSTREAMS_LIB) $(CUDA_LIBS) $(PETSC_LIB) $(HDF5_LDFLAGS) $(HDF5_LIBS) $(PARMETIS_LIB) $(BOOST_UNIT_TEST_FRAMEWORK_LIB) $(BOOST_CHRONO_LIB) $(BOOST_TIMER_LIB) $(BOOST_SYSTEM_LIB) noinst_PROGRAMS = pdata pdata_SOURCES = main.cpp Grid/grid_dist_id_unit_test.cpp lib/pdata.cpp test_multiple_o.cpp ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp -pdata_CXXFLAGS = $(AM_CXXFLAGS) $(LIBHILBERT_INCLUDE) $(PETSC_INCLUDE) $(HDF5_CPPFLAGS) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(PARMETIS_INCLUDE) $(METIS_INCLUDE) $(BOOST_CPPFLAGS) $(H5PART_INCLUDE) -DPARALLEL_IO -Wno-unused-local-typedefs +pdata_CXXFLAGS = $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(LIBHILBERT_INCLUDE) $(PETSC_INCLUDE) $(HDF5_CPPFLAGS) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(PARMETIS_INCLUDE) $(METIS_INCLUDE) $(BOOST_CPPFLAGS) $(H5PART_INCLUDE) -DPARALLEL_IO -Wno-unused-local-typedefs pdata_CFLAGS = $(CUDA_CFLAGS) pdata_LDADD = $(LINKLIBS) -lparmetis -lmetis nobase_include_HEADERS = Decomposition/CartDecomposition.hpp Decomposition/CartDecomposition_ext.hpp Decomposition/common.hpp Decomposition/Decomposition.hpp Decomposition/ie_ghost.hpp \ @@ -18,7 +18,7 @@ nobase_include_HEADERS = Decomposition/CartDecomposition.hpp Decomposition/CartD lib_LIBRARIES = libofpm_pdata.a libofpm_pdata_a_SOURCES = lib/pdata.cpp -libofpm_pdata_a_CXXFLAGS = $(AM_CXXFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) -I/usr/local/include -Wno-unused-local-typedefs +libofpm_pdata_a_CXXFLAGS = $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) -I/usr/local/include -Wno-unused-local-typedefs libofpm_pdata_a_CFLAGS = .cu.o :