From 7c3e55ac01473559861d6c7c02c19b2f2ae84ad1 Mon Sep 17 00:00:00 2001
From: Pietro Incardona <incardon@mpi-cbg.de>
Date: Wed, 26 Dec 2018 00:02:28 +0100
Subject: [PATCH] Removing autotools Macro and build system
---
build.sh | 107 +------
configure.ac | 483 -----------------------------
m4/acx_mpi.m4 | 141 ---------
m4/acx_pthread.m4 | 242 ---------------
m4/ax_blas.m4 | 239 --------------
m4/ax_boost_base.m4 | 286 -----------------
m4/ax_boost_iostreams.m4 | 119 -------
m4/ax_boost_program_options.m4 | 110 -------
m4/ax_boost_unit_test_framework.m4 | 139 ---------
m4/ax_check_compiler_flags.m4 | 76 -----
m4/ax_cuda.m4 | 84 -----
m4/ax_eigen.m4 | 87 ------
m4/ax_gcc_archflag.m4 | 220 -------------
m4/ax_gcc_version.m4 | 65 ----
m4/ax_gcc_x86_cpuid.m4 | 79 -----
m4/ax_lapack.m4 | 132 --------
m4/ax_lib_hdf5.m4 | 312 -------------------
m4/ax_lib_mysql.m4 | 145 ---------
m4/ax_libhilbert.m4 | 143 ---------
m4/ax_opencl.m4 | 119 -------
m4/ax_openmp.m4 | 99 ------
m4/ax_petsc_lib.m4 | 144 ---------
m4/ax_suitesparse.m4 | 131 --------
m4/immdx_lib_metis.m4 | 82 -----
m4/immdx_lib_parmetis.m4 | 88 ------
25 files changed, 16 insertions(+), 3856 deletions(-)
delete mode 100644 configure.ac
delete mode 100644 m4/acx_mpi.m4
delete mode 100644 m4/acx_pthread.m4
delete mode 100644 m4/ax_blas.m4
delete mode 100644 m4/ax_boost_base.m4
delete mode 100644 m4/ax_boost_iostreams.m4
delete mode 100644 m4/ax_boost_program_options.m4
delete mode 100644 m4/ax_boost_unit_test_framework.m4
delete mode 100644 m4/ax_check_compiler_flags.m4
delete mode 100644 m4/ax_cuda.m4
delete mode 100644 m4/ax_eigen.m4
delete mode 100644 m4/ax_gcc_archflag.m4
delete mode 100644 m4/ax_gcc_version.m4
delete mode 100644 m4/ax_gcc_x86_cpuid.m4
delete mode 100644 m4/ax_lapack.m4
delete mode 100644 m4/ax_lib_hdf5.m4
delete mode 100644 m4/ax_lib_mysql.m4
delete mode 100644 m4/ax_libhilbert.m4
delete mode 100644 m4/ax_opencl.m4
delete mode 100644 m4/ax_openmp.m4
delete mode 100755 m4/ax_petsc_lib.m4
delete mode 100644 m4/ax_suitesparse.m4
delete mode 100644 m4/immdx_lib_metis.m4
delete mode 100644 m4/immdx_lib_parmetis.m4
diff --git a/build.sh b/build.sh
index 5f465221b..06571d0aa 100755
--- a/build.sh
+++ b/build.sh
@@ -46,97 +46,23 @@ fi
mkdir src/config
mkdir openfpm_numerics/src/config
-if [ "$hostname" == "gin" ]
-then
- echo "Compiling on gin\n"
+echo "Compiling general"
- source "$HOME/.bashrc"
-
- ## Check if MPI folder exist if not copy MPICH
-
- if [ ! -d $HOME/$branch/MPI ]; then
- echo "COPY MPICH"
- cp -R $HOME/MPI $HOME/$branch/MPI
- echo 2 > $HOME/$branch/MPI/version
- fi
-
- ### Activate MPI and binutils ###
-
- export PATH="$PATH:$HOME/$branch/MPI/bin"
- export PATH="/usr/local/binutils/bin/:$PATH"
-
- mkdir $HOME/$branch
- if [ x"$comp_type" == x"full" ]; then
- CC=gcc-4.9.2 CXX=g++-4.9.2 FC=gfortran-4.9.2 F77=gfortran-4.9.2 ./install -i $HOME/$branch -s -c "--prefix=/home/jenkins/openfpm_install"
- echo "Moving environment variable"
- mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
- source $HOME/openfpm_vars_$branch
- elif [ x"$comp_type" == x"numerics" ]; then
- branch=$(git ls-remote --heads origin | grep $(git rev-parse HEAD) | cut -d / -f 3)
- CC=gcc-4.9.2 CXX=g++-4.9.2 FC=gfortran-4.9.2 F77=gfortran-4.9.2 ./install -i $HOME/$branch -m -s -c "--prefix=/home/jenkins/openfpm_install"
- echo "Moving environment variable"
- mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
- source $HOME/openfpm_vars_$branch
- make -j 12
- else
- CC=gcc-4.9.2 CXX=g++-4.9.2 FC=gfortran-4.9.2 F77=gfortran-4.9.2 ./install -i $HOME/$branch -m -s -c "--prefix=/home/jenkins/openfpm_install --no-recursion"
- echo "Moving environment variables"
- mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
- source $HOME/openfpm_vars_$branch
- make -j 12
- fi
-
- if [ $? -ne 0 ]; then
- curl -X POST --data "payload={\"icon_emoji\": \":jenkins:\", \"username\": \"jenkins\" , \"attachments\":[{ \"title\":\"Error:\", \"color\": \"#FF0000\", \"text\":\"$hostname failed to complete the openfpm_pdata test \" }] }" https://hooks.slack.com/services/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
- exit 1 ;
- fi
-
-
- if [ $? -ne 0 ]; then
- curl -X POST --data "payload={\"icon_emoji\": \":jenkins:\", \"username\": \"jenkins\" , \"attachments\":[{ \"title\":\"Error:\", \"color\": \"#FF0000\", \"text\":\"$hostname failed to complete the openfpm_pdata test \" }] }" https://hooks.slack.com/services/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
- exit 1 ;
- fi
-
-elif [ "$hostname" == "taurus" ]
-then
- echo "Compiling on taurus"
-
- source /etc/profile
- echo "$PATH"
- module load gcc/7.1.0
- module load openmpi/3.0.0-gnu7.1
-
- export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:/home/incard/PARMETIS/lib:/home/incard/METIS/lib:/home/incard/HDF5/lib"
-
- mkdir /scratch/p_ppm/$branch
- ./install -m -i "/scratch/p_ppm/$branch" -s -c"CXX=mpic++ --no-recursion"
- mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
- source $HOME/openfpm_vars_$branch
- make -j 24
-
-
- if [ $? -ne 0 ]; then
- curl -X POST --data "payload={\"icon_emoji\": \":jenkins:\", \"username\": \"jenkins\" , \"attachments\":[{ \"title\":\"Error:\", \"color\": \"#FF0000\", \"text\":\"$hostname failed to complete the openfpm_pdata test \" }] }" https://hooks.slack.com/services/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
- exit 1 ;
- fi
-else
- echo "Compiling general"
-
- source ~/.bashrc
+source ~/.bashrc
- installation_dir=""
- if [ x"$hostname" == x"sbalzarini-mac-15" ]; then
+installation_dir=""
+if [ x"$hostname" == x"sbalzarini-mac-15" ]; then
installation_dir="--prefix=/Users/jenkins/openfpm_install"
- else
+else
installation_dir="--prefix=$HOME/openfpm_install/$branch"
- fi
+fi
- # force ssh to not use HostKey verification
- echo "StrictHostKeyChecking=no" > $HOME/.ssh/config
- chmod 600 $HOME/.ssh/config
+# force ssh to not use HostKey verification
+echo "StrictHostKeyChecking=no" > $HOME/.ssh/config
+chmod 600 $HOME/.ssh/config
- mkdir $HOME/openfpm_dependencies/openfpm_pdata/$branch
- if [ x"$comp_type" == x"full" ]; then
+mkdir $HOME/openfpm_dependencies/openfpm_pdata/$branch
+if [ x"$comp_type" == x"full" ]; then
echo "Installing with: ./install -i $HOME/openfpm_dependencies/openfpm_pdata/$branch -s -c \"$installation_dir\" "
./install -i $HOME/openfpm_dependencies/openfpm_pdata/$branch -s -c "$installation_dir"
make install
@@ -146,7 +72,7 @@ else
fi
mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
source $HOME/openfpm_vars_$branch
- elif [ x"$comp_type" == x"numerics" ]; then
+elif [ x"$comp_type" == x"numerics" ]; then
./install -i $HOME/openfpm_dependencies/openfpm_pdata/$branch -m -s -c "$installation_dir"
if [ $? -ne 0 ]; then
@@ -156,7 +82,7 @@ else
mv $HOME/openfpm_vars $HOME/openfpm_vars_$branch
source $HOME/openfpm_vars_$branch
make VERBOSE=1 -j 8
- else
+else
echo "Installing with: ./install -i $HOME/openfpm_dependencies/openfpm_pdata/$branch -m -s -c \"$installation_dir --no-recursion\""
./install -i $HOME/openfpm_dependencies/openfpm_pdata/$branch -m -s -c "$installation_dir"
@@ -171,13 +97,12 @@ else
echo "$PATH"
echo "-------------------------------------------"
make VERBOSE=1 -j 8
- fi
+fi
- if [ $? -ne 0 ]; then
+if [ $? -ne 0 ]; then
curl -X POST --data "payload={\"icon_emoji\": \":jenkins:\", \"username\": \"jenkins\" , \"attachments\":[{ \"title\":\"Error:\", \"color\": \"#FF0000\", \"text\":\"$hostname failed to complete the openfpm_pdata test \" }] }" https://hooks.slack.com/services/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
exit 1 ;
- fi
-
fi
+
diff --git a/configure.ac b/configure.ac
deleted file mode 100644
index 694eb3720..000000000
--- a/configure.ac
+++ /dev/null
@@ -1,483 +0,0 @@
-# -*- Autoconf -*-
-# Process this file with autoconf to produce a configure script.
-
-## Take all the options with the exception of --enable-install-req
-
-AC_PREREQ(2.59)
-AC_INIT(OpenFPM_pdata, 1.0.0, BUG-REPORT-ADDRESS)
-AC_CANONICAL_SYSTEM
-AC_CONFIG_SRCDIR([src/main.cpp])
-AC_CONFIG_SUBDIRS([openfpm_data openfpm_devices openfpm_vcluster openfpm_io openfpm_numerics])
-AC_CONFIG_MACRO_DIRS([m4])
-
-#### Adding --with-pdata option and openfpm_pdata to prefix folder
-
-if test "$prefix" = "NONE"; then
- prefix=/usr/local
-fi
-base=$prefix
-prefix="$prefix/openfpm_pdata"
-echo "Installation dir is: $prefix"
-
-ac_configure_args="$ac_configure_args --with-pdata=../../src"
-
-########################
-
-AM_INIT_AUTOMAKE([subdir-objects foreign])
-AC_CONFIG_HEADER([src/config/config.h])
-m4_ifdef([ACX_PTHREAD],,[m4_include([m4/acx_pthread.m4])])
-m4_ifdef([ACX_MPI],,[m4_include([m4/acx_mpi.m4])])
-m4_ifdef([AX_OPENMP],,[m4_include([m4/ax_openmp.m4])])
-m4_ifdef([AX_CUDA],,[m4_include([m4/ax_cuda.m4])])
-m4_ifdef([IMMDX_LIB_METIS],,[m4_include([m4/immdx_lib_metis.m4])])
-m4_ifdef([IMMDX_LIB_PARMETIS],,[m4_include([m4/immdx_lib_parmetis.m4])])
-m4_ifdef([AX_BOOST_BASE],,[m4_include([m4/ax_boost_base.m4])])
-m4_ifdef([AX_BOOST_IOSTREAMS],,[m4_include([m4/ax_boost_iostreams.m4])])
-m4_ifdef([AX_BOOST_PROGRAM_OPTIONS],,[m4_include([m4/ax_boost_program_options.m4])])
-m4_ifdef([AX_BOOST_UNIT_TEST_FRAMEWORK],,[m4_include([m4/ax_boost_unit_test_framework.m4])])
-m4_ifdef([AX_BLAS],,[m4_include([m4/ax_blas.m4])])
-m4_ifdef([AX_LAPACK],,[m4_include([m4/ax_lapack.m4])])
-m4_ifdef([AX_SUITESPARSE],,[m4_include([m4/ax_suitesparse.m4])])
-m4_ifdef([AX_EIGEN],,[m4_include([m4/ax_eigen.m4])])
-m4_ifdef([AX_LIB_HDF5],,[m4_include([m4/ax_lib_hdf5.m4])])
-m4_ifdef([AX_LIB_PETSC],,[m4/ax_petsc_lib.m4])
-m4_ifdef([AX_LIB_HILBERT],,[m4/ax_libhilbert.m4])
-
-case $host_os in
- *darwin*|*macosx*)
- CXXFLAGS+=" --std=c++11 "
- AC_DEFINE([HAVE_OSX],[],[We have OSX])
- ;;
- *cygwin*)
- # Do something specific for cygwin
- CXXFLAGS+=" --std=gnu++11 "
- ;;
- *)
- #Default Case
- CXXFLAGS+=" --std=c++11 "
- ;;
-esac
-
-NVCCFLAGS=" "
-INCLUDES_PATH=" "
-
-# Create a file with the install base folder
-echo "$base" > install_dir
-
-# Needed for build library
-LT_INIT
-
-# Checks for programs.
-AC_PROG_CXX
-
-# Checks g++ flags
-
-AC_CANONICAL_HOST
-
-# Check that the compiler support mpi
-
-AC_LANG_PUSH([C++])
-AC_CHECK_HEADER(mpi.h,[],[echo "mpi.h not found"
- exit 200])
-AC_LANG_POP([C++])
-
-# Check target architetture
-
-#AX_GCC_ARCHFLAG([], [CXXFLAGS="$CXXFLAGS $ax_cv_gcc_archflag"], [])
-
-###### Check for debug compilation
-
-AC_MSG_CHECKING(whether to build with debug information)
-debuger=no
-AC_ARG_ENABLE(debug,
- AC_HELP_STRING(
- [--enable-debug],
- [enable debug data generation (def=no)]
- ),
- debuger="$enableval"
-)
-
-
-
-AC_MSG_RESULT($debuger)
-if test x"$debuger" = x"yes"; then
- AC_DEFINE([DEBUG_MODE],[],[Debug])
- AC_DEFINE([DEBUG],[],[Debug])
- CXXFLAGS="$CXXFLAGS -g3 -Wall -O0 "
- NVCCFLAGS+="$NVCCFLAGS -g -O0 "
-else
- CXXFLAGS="$CXXFLAGS -Wall -O3 -g3 -funroll-loops "
- NVCCFLAGS+="$NVCCFLAGS -O3 "
-fi
-
-#########
-
-## Check for Metis
-
-IMMDX_LIB_METIS([],[echo "Cannot detect metis, use the --with-metis option if it is not installed in the default location"
- exit 201])
-
-#########
-
-## Check for MPI
-
-ACX_MPI()
-
-## Check for HDF5
-
-AX_LIB_HDF5([parallel])
-
-if test x"$with_hdf5" = x"no"; then
- echo "Cannot detect hdf5, use the --with-hdf5 option if it is not installed in the default location"
- exit 207
-fi
-
-##########
-
-## Check for LIBHILBERT
-
-AX_LIB_HILBERT([],[echo "Cannot detect libhilbert, use the --with-libhilbert option if it is not installed in the default location"
- exit 210])
-
-
-have_quad_lib=no
-have_quad_head=no
-AC_CHECK_LIB(quadmath, sinq, [have_quad_lib=yes], [])
-AC_CHECK_HEADER(quadmath.h,[have_quad_head=yes],[])
-
-if test x"have_quad_math" == x"yes"; then
- AC_DEFINE(HAVE_LIBQUADMATH,[],[Have quad math lib])
- LIBQUADMATH=" -lquadmath "
-fi
-
-AC_CHECK_LIB(ifcore, for_cpystr, [ LIBIFCORE=-lifcore ], [ LIBIFCORE= ])
-AC_SUBST(LIBIFCORE)
-
-AC_SUBST(OPENMP_CFLAGS)
-AC_SUBST(OPENMP_LDFLAGS)
-
-echo "$OPENMP_CFLAGS" > openmp_flags
-
-########
-
-## Enable scan coverty
-
-AC_MSG_CHECKING(whether to build for scan coverty compilation)
-AC_ARG_ENABLE(scan-coverty,
- AC_HELP_STRING(
- [--enable-scan-coverty],
- [enable scan-coverty compilation (def=no)]
- ),
- scancoverty="$enableval"
-)
-
-AC_MSG_RESULT($scancoverty)
-
-if test x"$scancoverty" = x"yes"; then
- AC_DEFINE([COVERTY_SCAN],[],[Compile for coverty scan])
-fi
-
-###### Check for performance test
-
-AC_MSG_CHECKING(whether to build with performance test)
-test_per=no
-AC_ARG_ENABLE(test-performance,
- AC_HELP_STRING(
- [--enable-test-performance],
- [enable test performance]
- ),
- test_per="$enableval"
- INCLUDES_PATH+="-I../openfpm_numerics/src "
-)
-
-
-
-AC_MSG_RESULT($test_per)
-if test x"$test_per" = x"yes"; then
- AC_DEFINE([PERFORMANCE_TEST],[],[Test performance mode])
-fi
-
-###### Check for test coverage
-
-AC_MSG_CHECKING(whether to build with test coverage)
-test_cov=no
-AC_ARG_ENABLE(test-coverage,
- AC_HELP_STRING(
- [--enable-test-coverage],
- [enable test coverage]
- ),
- test_cov="$enableval"
-)
-
-
-
-AC_MSG_RESULT($test_cov)
-if test x"$test_cov" = x"yes"; then
- AC_DEFINE([TEST_COVERAGE_MODE],[],[Test coverage mode])
- CXXFLAGS="$CXXFLAGS -fprofile-arcs -ftest-coverage "
-fi
-
-
-###### Checking for compiler flags -fext-numeric-literals
-
-AC_LANG_PUSH([C++])
-
-my_save_cflags="$CXXFLAGS"
-CXXFLAGS=-fext-numeric-literals
-AC_MSG_CHECKING([whether CXX supports -fext-numeric-literals])
-AC_COMPILE_IFELSE([AC_LANG_PROGRAM([])],
- [AC_MSG_RESULT([yes])
- AM_CXXFLAGS="-fext-numeric-literals"
- echo "-fext-numeric-literals" > openfpm_flags
- ],
- [
- AC_MSG_RESULT([no])
- echo "" > openfpm_flags
- ]
-)
-AC_LANG_POP([C++])
-CXXFLAGS="$my_save_cflags"
-
-AC_SUBST([AM_CXXFLAGS])
-
-
-## Check for parMetis
-
-IMMDX_LIB_PARMETIS([],[echo "Cannot detect parmetis, use the --with-parmetis option if it is not installed in the default location"
- exit 208])
-
-####### include OpenFPM_devices include path
-
-INCLUDES_PATH+="-I. -Iconfig/ -I../openfpm_io/src -I../openfpm_data/src -I../openfpm_devices/src -I../openfpm_vcluster/src/"
-
-###### Check for se-class1
-
-AC_MSG_CHECKING(whether to build with security enhancement class1)
-se_class1=no
-AC_ARG_ENABLE(se-class1,
- AC_HELP_STRING(
- [--enable-se-class1],
- [enable security enhancement class1]
- ),
- se_class1="$enableval"
-)
-
-
-
-AC_MSG_RESULT($se_class1)
-if test x"$se_class1" = x"yes"; then
- AC_DEFINE([SE_CLASS1],[],[Security enhancement class 1])
-fi
-
-
-###### Check for se-class 2
-
-AC_MSG_CHECKING(whether to build with security enhancement class 2)
-se_class2=no
-AC_ARG_ENABLE(se-class2,
- AC_HELP_STRING(
- [--enable-se-class2],
- [enable security enhancement class 2]
- ),
- se_class2="$enableval"
-)
-
-
-AC_MSG_RESULT($se_class2)
-if test x"$se_class2" = x"yes"; then
- AC_DEFINE([SE_CLASS2],[],[Security enhancement class 2])
-fi
-
-###### Check for se-class 3
-
-AC_MSG_CHECKING(whether to build with security enhancement class 3)
-se_class3=no
-AC_ARG_ENABLE(se-class3,
- AC_HELP_STRING(
- [--enable-se-class3],
- [enable security enhancement class 3]
- ),
- se_class3="$enableval"
-)
-
-
-
-AC_MSG_RESULT($se_class3)
-if test x"$se_class3" = x"yes"; then
- AC_DEFINE([SE_CLASS3],[],[Security enhancement class 3])
-fi
-
-###### Check for action on error
-
-action_on_e=continue
-AC_ARG_WITH([action-on-error],
- AS_HELP_STRING([--with-action-on-error=stop,throw,continue],
- [specify the action to do in case of error]),
- [action_on_e="$withval"],
- [action_on_e=continue])
-
-if test x"$action_on_e" = x"stop"; then
- AC_DEFINE([STOP_ON_ERROR],[],[If an error occur stop the program])
-fi
-if test x"$action_on_e" = x"throw"; then
- AC_DEFINE([THROW_ON_ERROR],[],[when an error accur continue but avoid unsafe operation])
-fi
-
-##### CHECK FOR BOOST ##############
-
-AX_BOOST_BASE([1.52],[],[echo "boost not found"
- exit 202])
-AX_BOOST_UNIT_TEST_FRAMEWORK
-AX_BOOST_PROGRAM_OPTIONS
-AX_BOOST_IOSTREAMS
-
-if test x"$ax_cv_boost_unit_test_framework" = x"no"; then
- echo "Notify boost unit test framework not usable"
- exit 202
-fi
-
-if test x"$ax_cv_boost_iostreams" = x"no"; then
- echo "Notify boost iostream not usable"
- exit 202
-fi
-
-if test x"$ax_cv_boost_programs_options" = x"no"; then
- echo "Notify boost program options not usable"
- exit 202
-fi
-
-### Unfortunately a lot of linux distros install a pretty old MPI in the system wide folder,
-### override such MPI with the installed one is extremely difficult and tricky, because we want
-### to include "some" system library but exclude mpi. One possibility is to give specifically
-### the wanted libmpi.so directly to the linker. But this is not possible because this lib is
-### given by mpic++ in the form -L/path/to/mpi -lmpi, the other is completely eliminate every
-### -L with a system default library
-###
-
-# eliminate any /usr/lib and and /usr/include from $BOOST_LIB and $BOOST_INCLUDE
-
-BOOST_LDFLAGS=$(echo "$BOOST_LDFLAGS" | sed -e 's/ -L\/usr\/lib64[ \b]//g' | sed -e 's/ -L\/usr\/lib[ \b]//g')
-BOOST_CPPFLAGS=$(echo "$BOOST_CPPFLAGS" | sed -e 's/-I\/usr\/include[ \b]//g')
-
-AC_SUBST(BOOST_LDFLAGS)
-AC_SUBST(BOOST_CPPFLAGS)
-
-AX_BLAS([],[])
-
-AX_LAPACK([],[])
-
-###### Checking for SUITESPARSE
-
-AX_SUITESPARSE([],[])
-
-##########
-
-## Check for PETSC
-
-AX_LIB_PETSC()
-
-###### Checking for EIGEN
-
-AX_EIGEN([],[])
-
-###### RT runtime lib
-
-AC_CHECK_LIB(rt, clock_gettime, [AC_DEFINE([HAVE_CLOCK_GETTIME],[],[Have clock time])
- OPT_LIBS="$OPT_LIBS -lrt"
- ])
-
-####### Checking for GPU support
-
-AX_CUDA
-
-## detect for NVCC
-
-if test x"$NVCC_EXIST" = x"yes"; then
- AC_MSG_CHECKING(whether to build with GPU support)
- gpu_support=yes
- AC_ARG_ENABLE(gpu,
- AC_HELP_STRING(
- [--enable-gpu],
- [enable gpu support]
- ),
- gpu_support="$enableval"
- )
-
- AC_MSG_RESULT($gpu_support)
- if test x"$gpu_support" = x"yes"; then
- AC_DEFINE([CUDA_GPU],[],[GPU support])
- else
- CUDA_LIBS=""
- CUDA_CFLAGS=""
- fi
-else
- gpu_support=no
- INITIALIZATION_SOURCE="initialize_openfpm.cpp"
-fi
-
-if test x$gpu_support = x"no"; then
- CUDA_LIBS=""
- CUDA_CFLAGS=""
-fi
-
-# Set this conditional if cuda is wanted
-
-AM_CONDITIONAL(BUILDCUDA, test ! x$NVCC = x"no")
-
-###########################
-
-# Define that there is MPI
-
-AC_DEFINE([HAVE_MPI],[],[MPI Enabled])
-
-AC_SUBST(NVCCFLAGS)
-AC_SUBST(INCLUDES_PATH)
-AC_SUBST(OPT_LIBS)
-
-# Checks for typedefs, structures, and compiler characteristics.
-
-# Checks for library functions.
-
-AC_CONFIG_FILES([Makefile src/Makefile images/Makefile ])
-AC_OUTPUT
-echo ""
-echo "***********************************"
-echo "* *"
-if [ test x"$profiler" = x"yes" ]; then
- echo "* profiler: yes *"
-else
- echo "* profiler: no *"
-fi
-if [ test x"$memcheck" = x"yes" ]; then
- echo "* memcheck: yes *"
-else
- echo "* memcheck: no *"
-fi
-if [ test x"$debuger" = x"yes" ]; then
- echo "* debug: yes *"
-else
- echo "* debug: no *"
-fi
-if [ test x"$se_class1" = x"yes" ]; then
- echo "* se-class1: yes *"
-else
- echo "* se-class1: no *"
-fi
-if [ test x"$se_class2" = x"yes" ]; then
- echo "* se-class2: yes *"
-else
- echo "* se-class2: no *"
-fi
-if [ test x"$se_class3" = x"yes" ]; then
- echo "* se-class3: yes *"
-else
- echo "* se-class3: no *"
-fi
-if [ test x"$gpu_support" = x"no" ]; then
- echo "* gpu: no *"
-else
- echo "* gpu: yes *"
-fi
-echo "* *"
-echo "***********************************"
-
diff --git a/m4/acx_mpi.m4 b/m4/acx_mpi.m4
deleted file mode 100644
index 9ea757ecf..000000000
--- a/m4/acx_mpi.m4
+++ /dev/null
@@ -1,141 +0,0 @@
-dnl @synopsis ACX_MPI([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-dnl
-dnl This macro tries to find out how to compile programs that use MPI
-dnl (Message Passing Interface), a standard API for parallel process
-dnl communication (see http://www-unix.mcs.anl.gov/mpi/)
-dnl
-dnl On success, it sets the MPICC, MPICXX, or MPIF77 output variable to
-dnl the name of the MPI compiler, depending upon the current language.
-dnl (This may just be $CC/$CXX/$F77, but is more often something like
-dnl mpicc/mpiCC/mpif77.) It also sets MPILIBS to any libraries that are
-dnl needed for linking MPI (e.g. -lmpi, if a special
-dnl MPICC/MPICXX/MPIF77 was not found).
-dnl
-dnl If you want to compile everything with MPI, you should set:
-dnl
-dnl CC="$MPICC" #OR# CXX="$MPICXX" #OR# F77="$MPIF77"
-dnl LIBS="$MPILIBS $LIBS"
-dnl
-dnl The user can force a particular library/compiler by setting the
-dnl MPICC/MPICXX/MPIF77 and/or MPILIBS environment variables.
-dnl
-dnl ACTION-IF-FOUND is a list of shell commands to run if an MPI
-dnl library is found, and ACTION-IF-NOT-FOUND is a list of commands to
-dnl run it if it is not found. If ACTION-IF-FOUND is not specified, the
-dnl default action will define HAVE_MPI.
-dnl
-dnl @category InstalledPackages
-dnl @author Steven G. Johnson <stevenj@alum.mit.edu>
-dnl @version 2004-11-05
-dnl @license GPLWithACException
-
-AC_DEFUN([ACX_MPI], [
-AC_PREREQ(2.50) dnl for AC_LANG_CASE
-
-AC_LANG_CASE([C], [
- AC_REQUIRE([AC_PROG_CC])
- AC_ARG_VAR(MPICC,[MPI C compiler command])
- AC_CHECK_PROGS(MPICC, mpicc hcc mpcc mpcc_r mpxlc cmpicc, $CC)
- acx_mpi_save_CC="$CC"
- LAMMPICC="$CC"
- CC="$MPICC"
- AC_SUBST(MPICC)
-],
-[C++], [
- AC_REQUIRE([AC_PROG_CXX])
- AC_ARG_VAR(MPICXX,[MPI C++ compiler command])
- AC_CHECK_PROGS(MPICXX, mpic++ mpicxx mpiCC mpCC hcp mpxlC mpxlC_r cmpic++, $CXX)
- acx_mpi_save_CXX="$CXX"
- LAMMPICXX="$CXX"
- CXX="$MPICXX"
- AC_SUBST(MPICXX)
-],
-[Fortran 77], [
- AC_REQUIRE([AC_PROG_F77])
- AC_ARG_VAR(MPIF77,[MPI Fortran compiler command])
- AC_CHECK_PROGS(MPIF77, mpif77 hf77 mpxlf mpf77 mpif90 mpf90 mpxlf90 mpxlf95 mpxlf_r cmpifc cmpif90c, $F77)
- acx_mpi_save_F77="$F77"
- LAMMPIF77="$F77"
- F77="$MPIF77"
- AC_SUBST(MPIF77)
-])
-
-if test x = x"$MPILIBS"; then
- AC_LANG_CASE([C], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])],
- [C++], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])],
- [Fortran 77], [AC_MSG_CHECKING([for MPI_Init])
- AC_TRY_LINK([],[ call MPI_Init], [MPILIBS=" "
- AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])])
-fi
-
-INC_PATH=$(mpic++ --showme:compile)
-LIB_DIRS=$(mpic++ --showme:libdirs)
-LIBS_MPI_LIST=$(mpic++ --showme:libs)
-
-IFS=' ' read -r -a array <<< "$INC_PATH"
-MPI_INC_PATH=""
-for element in "${array[[@]]}"
-do
- if [[ x"$element" != x"-pthread" ]]; then
- MPI_INC_PATH="$MPI_INC_PATH $element"
- fi
-done
-
-IFS=' ' read -r -a array <<< "$LIB_DIRS"
-MPI_LIB_DIRS=""
-for element in "${array[[@]]}"
-do
- MPI_LIB_DIRS="$MPI_LIB_DIRS -L$element"
-done
-
-IFS=' ' read -r -a array <<< "$LIBS"
-LIBS_MPI_LIST=""
-for element in "${array[[@]]}"
-do
- MPI_LIBS="$LIBS_MPI_LIST -l$element"
-done
-
-
-AC_SUBST(MPI_INC_PATH)
-AC_SUBST(MPI_LIB_DIRS)
-AC_SUBST(MPI_LIBS)
-
-if test x = x"$MPILIBS"; then
- AC_CHECK_LIB(mpi, MPI_Init, [MPILIBS="-lmpi"])
-fi
-if test x = x"$MPILIBS"; then
- AC_CHECK_LIB(mpich, MPI_Init, [MPILIBS="-lmpich"])
-fi
-
-dnl We have to use AC_TRY_COMPILE and not AC_CHECK_HEADER because the
-dnl latter uses $CPP, not $CC (which may be mpicc).
-AC_LANG_CASE([C], [if test x != x"$MPILIBS"; then
- AC_MSG_CHECKING([for mpi.h])
- export LAMMPICC="$acx_mpi_save_CC"
- AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS=""
- AC_MSG_RESULT(no)])
- unset LAMMPICC
-fi],
-[C++], [if test x != x"$MPILIBS"; then
- AC_MSG_CHECKING([for mpi.h])
- export LAMMPICXX="$acx_mpi_save_CXX"
- AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS=""
- AC_MSG_RESULT(no)])
- unset LAMMPICXX
-fi])
-
-AC_LANG_CASE([C], [CC="$acx_mpi_save_CC"],
- [C++], [CXX="$acx_mpi_save_CXX"],
- [Fortran 77], [F77="$acx_mpi_save_F77"])
-
-AC_SUBST(MPILIBS)
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x = x"$MPILIBS"; then
- $2
- :
-else
- ifelse([$1],,[AC_DEFINE(HAVE_MPI,1,[Define if you have the MPI library.])],[$1])
- :
-fi
-])dnl ACX_MPI
diff --git a/m4/acx_pthread.m4 b/m4/acx_pthread.m4
deleted file mode 100644
index 508df866b..000000000
--- a/m4/acx_pthread.m4
+++ /dev/null
@@ -1,242 +0,0 @@
-dnl
-dnl ACX_PTHREAD([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-dnl
-dnl Description
-dnl
-dnl This macro figures out how to build C programs using POSIX threads. It
-dnl sets the PTHREAD_LIBS output variable to the threads library and linker
-dnl flags, and the PTHREAD_CFLAGS output variable to any special C compiler
-dnl flags that are needed. (The user can also force certain compiler
-dnl flags/libs to be tested by setting these environment variables.)
-dnl
-dnl Also sets PTHREAD_CC to any special C compiler that is needed for
-dnl multi-threaded programs (defaults to the value of CC otherwise). (This is
-dnl necessary on AIX to use the special cc_r compiler alias.)
-dnl
-dnl NOTE: You are assumed to not only compile your program with these flags,
-dnl but also link it with them as well. e.g. you should link with $PTHREAD_CC
-dnl $CFLAGS $PTHREAD_CFLAGS $LDFLAGS ... $PTHREAD_LIBS $LIBS
-dnl
-dnl If you are only building threads programs, you may wish to use these
-dnl variables in your default LIBS, CFLAGS, and CC:
-dnl
-dnl LIBS="$PTHREAD_LIBS $LIBS"
-dnl CFLAGS="$CFLAGS $PTHREAD_CFLAGS"
-dnl CC="$PTHREAD_CC"
-dnl
-dnl In addition, if the PTHREAD_CREATE_JOINABLE thread-attribute constant
-dnl has a nonstandard name, defines PTHREAD_CREATE_JOINABLE to that name
-dnl (e.g. PTHREAD_CREATE_UNDETACHED on AIX).
-dnl
-dnl ACTION-IF-FOUND is a list of shell commands to run if a threads library
-dnl is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it
-dnl is not found. If ACTION-IF-FOUND is not specified, the default action
-dnl will define HAVE_PTHREAD.
-dnl
-dnl Please let the authors know if this macro fails on any platform, or if
-dnl you have any other suggestions or comments. This macro was based on work
-dnl by SGJ on autoconf scripts for FFTW (www.fftw.org) (with help from M.
-dnl Frigo), as well as ac_pthread and hb_pthread macros posted by AFC to the
-dnl autoconf macro repository. We are also grateful for the helpful feedback
-dnl of numerous users.
-dnl
-dnl Version: 1.8 (last modified: 2003-05-21)
-dnl Author: Steven G. Johnson <stevenj@alum.mit.edu> and
-dnl Alejandro Forero Cuervo <bachue@bachue.com>
-dnl
-dnl from http://www.gnu.org/software/ac-archive/htmldoc/index.html
-dnl
-dnl License:
-dnl GNU General Public License
-dnl [http://www.gnu.org/software/ac-archive/htmldoc/COPYING.html]
-dnl with this special exception
-dnl [http://www.gnu.org/software/ac-archive/htmldoc/COPYING-Exception.html].
-dnl
-
-AC_DEFUN([ACX_PTHREAD], [
-AC_REQUIRE([AC_CANONICAL_HOST])
-AC_LANG_SAVE
-AC_LANG_C
-acx_pthread_ok=no
-
-# We used to check for pthread.h first, but this fails if pthread.h
-# requires special compiler flags (e.g. on True64 or Sequent).
-# It gets checked for in the link test anyway.
-
-# First of all, check if the user has set any of the PTHREAD_LIBS,
-# etcetera environment variables, and if threads linking works using
-# them:
-if test x"$PTHREAD_LIBS$PTHREAD_CFLAGS" != x; then
- save_CFLAGS="$CFLAGS"
- CFLAGS="$CFLAGS $PTHREAD_CFLAGS"
- save_LIBS="$LIBS"
- LIBS="$PTHREAD_LIBS $LIBS"
- AC_MSG_CHECKING([for pthread_join in LIBS=$PTHREAD_LIBS with CFLAGS=$PTHREAD_CFLAGS])
- AC_TRY_LINK_FUNC(pthread_join, acx_pthread_ok=yes)
- AC_MSG_RESULT($acx_pthread_ok)
- if test x"$acx_pthread_ok" = xno; then
- PTHREAD_LIBS=""
- PTHREAD_CFLAGS=""
- fi
- LIBS="$save_LIBS"
- CFLAGS="$save_CFLAGS"
-fi
-
-# We must check for the threads library under a number of different
-# names; the ordering is very important because some systems
-# (e.g. DEC) have both -lpthread and -lpthreads, where one of the
-# libraries is broken (non-POSIX).
-
-# Create a list of thread flags to try. Items starting with a "-" are
-# C compiler flags, and other items are library names, except for "none"
-# which indicates that we try without any flags at all.
-
-acx_pthread_flags="pthreads none -Kthread -kthread lthread -pthread -pthreads -mthreads pthread --thread-safe -mt"
-
-# The ordering *is* (sometimes) important. Some notes on the
-# individual items follow:
-
-# pthreads: AIX (must check this before -lpthread)
-# none: in case threads are in libc; should be tried before -Kthread and
-# other compiler flags to prevent continual compiler warnings
-# -Kthread: Sequent (threads in libc, but -Kthread needed for pthread.h)
-# -kthread: FreeBSD kernel threads (preferred to -pthread since SMP-able)
-# lthread: LinuxThreads port on FreeBSD (also preferred to -pthread)
-# -pthread: Linux/gcc (kernel threads), BSD/gcc (userland threads)
-# -pthreads: Solaris/gcc
-# -mthreads: Mingw32/gcc, Lynx/gcc
-# -mt: Sun Workshop C (may only link SunOS threads [-lthread], but it
-# doesn't hurt to check since this sometimes defines pthreads too;
-# also defines -D_REENTRANT)
-# pthread: Linux, etcetera
-# --thread-safe: KAI C++
-
-case "${host_cpu}-${host_os}" in
- *solaris*)
-
- # On Solaris (at least, for some versions), libc contains stubbed
- # (non-functional) versions of the pthreads routines, so link-based
- # tests will erroneously succeed. (We need to link with -pthread or
- # -lpthread.) (The stubs are missing pthread_cleanup_push, or rather
- # a function called by this macro, so we could check for that, but
- # who knows whether they'll stub that too in a future libc.) So,
- # we'll just look for -pthreads and -lpthread first:
-
- acx_pthread_flags="-pthread -pthreads pthread -mt $acx_pthread_flags"
- ;;
-esac
-
-if test x"$acx_pthread_ok" = xno; then
-for flag in $acx_pthread_flags; do
-
- case $flag in
- none)
- AC_MSG_CHECKING([whether pthreads work without any flags])
- ;;
-
- -*)
- AC_MSG_CHECKING([whether pthreads work with $flag])
- PTHREAD_CFLAGS="$flag"
- ;;
-
- *)
- AC_MSG_CHECKING([for the pthreads library -l$flag])
- PTHREAD_LIBS="-l$flag"
- ;;
- esac
-
- save_LIBS="$LIBS"
- save_CFLAGS="$CFLAGS"
- LIBS="$PTHREAD_LIBS $LIBS"
- CFLAGS="$CFLAGS $PTHREAD_CFLAGS"
-
- # Check for various functions. We must include pthread.h,
- # since some functions may be macros. (On the Sequent, we
- # need a special flag -Kthread to make this header compile.)
- # We check for pthread_join because it is in -lpthread on IRIX
- # while pthread_create is in libc. We check for pthread_attr_init
- # due to DEC craziness with -lpthreads. We check for
- # pthread_cleanup_push because it is one of the few pthread
- # functions on Solaris that doesn't have a non-functional libc stub.
- # We try pthread_create on general principles.
- AC_TRY_LINK([#include <pthread.h>],
- [pthread_t th; pthread_join(th, 0);
- pthread_attr_init(0); pthread_cleanup_push(0, 0);
- pthread_create(0,0,0,0); pthread_cleanup_pop(0); ],
- [acx_pthread_ok=yes])
-
- LIBS="$save_LIBS"
- CFLAGS="$save_CFLAGS"
-
- AC_MSG_RESULT($acx_pthread_ok)
- if test "x$acx_pthread_ok" = xyes; then
- break;
- fi
-
- PTHREAD_LIBS=""
- PTHREAD_CFLAGS=""
-done
-fi
-
-# Various other checks:
-if test "x$acx_pthread_ok" = xyes; then
- save_LIBS="$LIBS"
- LIBS="$PTHREAD_LIBS $LIBS"
- save_CFLAGS="$CFLAGS"
- CFLAGS="$CFLAGS $PTHREAD_CFLAGS"
-
- # Detect AIX lossage: threads are created detached by default
- # and the JOINABLE attribute has a nonstandard name (UNDETACHED).
- AC_MSG_CHECKING([for joinable pthread attribute])
- AC_TRY_LINK([#include <pthread.h>],
- [int attr=PTHREAD_CREATE_JOINABLE;],
- ok=PTHREAD_CREATE_JOINABLE, ok=unknown)
- if test x"$ok" = xunknown; then
- AC_TRY_LINK([#include <pthread.h>],
- [int attr=PTHREAD_CREATE_UNDETACHED;],
- ok=PTHREAD_CREATE_UNDETACHED, ok=unknown)
- fi
- if test x"$ok" != xPTHREAD_CREATE_JOINABLE; then
- AC_DEFINE(PTHREAD_CREATE_JOINABLE, $ok,
- [Define to the necessary symbol if this constant
- uses a non-standard name on your system.])
- fi
- AC_MSG_RESULT(${ok})
- if test x"$ok" = xunknown; then
- AC_MSG_WARN([we do not know how to create joinable pthreads])
- fi
-
- AC_MSG_CHECKING([if more special flags are required for pthreads])
- flag=no
- case "${host_cpu}-${host_os}" in
- *-aix* | *-freebsd*) flag="-D_THREAD_SAFE";;
- *solaris* | *-osf* | *-hpux*) flag="-D_REENTRANT";;
- esac
- AC_MSG_RESULT(${flag})
- if test "x$flag" != xno; then
- PTHREAD_CFLAGS="$flag $PTHREAD_CFLAGS"
- fi
-
- LIBS="$save_LIBS"
- CFLAGS="$save_CFLAGS"
-
- # More AIX lossage: must compile with cc_r
- AC_CHECK_PROG(PTHREAD_CC, cc_r, cc_r, ${CC})
-else
- PTHREAD_CC="$CC"
-fi
-
-AC_SUBST(PTHREAD_LIBS)
-AC_SUBST(PTHREAD_CFLAGS)
-AC_SUBST(PTHREAD_CC)
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x"$acx_pthread_ok" = xyes; then
- ifelse([$1],,AC_DEFINE(HAVE_PTHREAD,1,[Define if you have POSIX threads libraries and header files.]),[$1])
- :
-else
- acx_pthread_ok=no
- $2
-fi
-AC_LANG_RESTORE
-])dnl ACX_PTHREAD
\ No newline at end of file
diff --git a/m4/ax_blas.m4 b/m4/ax_blas.m4
deleted file mode 100644
index 87e7ae039..000000000
--- a/m4/ax_blas.m4
+++ /dev/null
@@ -1,239 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_blas.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-#
-# DESCRIPTION
-#
-# This macro looks for a library that implements the BLAS linear-algebra
-# interface (see http://www.netlib.org/blas/). On success, it sets the
-# BLAS_LIBS output variable to hold the requisite library linkages.
-#
-# To link with BLAS, you should link with:
-#
-# $BLAS_LIBS $LIBS $FLIBS
-#
-# in that order. FLIBS is the output variable of the
-# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
-# sometimes necessary in order to link with F77 libraries. Users will also
-# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
-# reason.
-#
-# Many libraries are searched for, from ATLAS to CXML to ESSL. The user
-# may also use --with-blas=<lib> in order to use some specific BLAS
-# library <lib>. In order to link successfully, however, be aware that you
-# will probably need to use the same Fortran compiler (which can be set
-# via the F77 env. var.) as was used to compile the BLAS library.
-#
-# ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is
-# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
-# not found. If ACTION-IF-FOUND is not specified, the default action will
-# define HAVE_BLAS.
-#
-# LICENSE
-#
-# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 14
-
-AU_ALIAS([ACX_BLAS], [AX_BLAS])
-AC_DEFUN([AX_BLAS], [
-AC_PREREQ(2.50)
-AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
-AC_REQUIRE([AC_CANONICAL_HOST])
-ax_blas_ok=no
-
-AC_ARG_WITH(blas,
- [AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
-case $with_blas in
- yes | "") ;;
- no) ax_blas_ok=disable ;;
- -* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
- *) BLAS_LIBS="-l$with_blas" ;;
-esac
-
-# Get fortran linker names of BLAS functions to check for.
-AC_F77_FUNC(sgemm)
-AC_F77_FUNC(dgemm)
-
-ax_blas_save_LIBS="$LIBS"
-LIBS="$LIBS $FLIBS"
-
-# First, check BLAS_LIBS environment variable
-if test $ax_blas_ok = no; then
-if test "x$BLAS_LIBS" != x; then
- save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
- AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
- AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
- AC_MSG_RESULT($ax_blas_ok)
- LIBS="$save_LIBS"
-fi
-fi
-
-# BLAS linked to by default? (happens on some supercomputers)
-if test $ax_blas_ok = no; then
- save_LIBS="$LIBS"; LIBS="$LIBS"
- AC_MSG_CHECKING([if $sgemm is being linked in already])
- AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
- AC_MSG_RESULT($ax_blas_ok)
- LIBS="$save_LIBS"
-fi
-
-# BLAS in OpenBLAS library? (http://xianyi.github.com/OpenBLAS/)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(openblas, $sgemm, [ax_blas_ok=yes
- BLAS_LIBS="-lopenblas"])
-fi
-
-# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(atlas, ATL_xerbla,
- [AC_CHECK_LIB(f77blas, $sgemm,
- [AC_CHECK_LIB(cblas, cblas_dgemm,
- [ax_blas_ok=yes
- BLAS_LIBS="-lcblas -lf77blas -latlas"],
- [], [-lf77blas -latlas])],
- [], [-latlas])])
-fi
-
-# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(blas, $sgemm,
- [AC_CHECK_LIB(dgemm, $dgemm,
- [AC_CHECK_LIB(sgemm, $sgemm,
- [ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
- [], [-lblas])],
- [], [-lblas])])
-fi
-
-# BLAS in Intel MKL library?
-if test $ax_blas_ok = no; then
- # MKL for gfortran
- if test x"$ac_cv_fc_compiler_gnu" = xyes; then
- # 64 bit
- if test $host_cpu = x86_64; then
- AC_CHECK_LIB(mkl_gf_lp64, $sgemm,
- [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
- [-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread])
- # 32 bit
- elif test $host_cpu = i686; then
- AC_CHECK_LIB(mkl_gf, $sgemm,
- [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf -lmkl_sequential -lmkl_core -lpthread"],,
- [-lmkl_gf -lmkl_sequential -lmkl_core -lpthread])
- fi
- # MKL for other compilers (Intel, PGI, ...?)
- else
- # 64-bit
- if test $host_cpu = x86_64; then
- AC_CHECK_LIB(mkl_intel_lp64, $sgemm,
- [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
- [-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread])
- # 32-bit
- elif test $host_cpu = i686; then
- AC_CHECK_LIB(mkl_intel, $sgemm,
- [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel -lmkl_sequential -lmkl_core -lpthread"],,
- [-lmkl_intel -lmkl_sequential -lmkl_core -lpthread])
- fi
- fi
-fi
-# Old versions of MKL
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl -lguide -lpthread"],,[-lguide -lpthread])
-fi
-
-# BLAS in Apple vecLib library?
-if test $ax_blas_ok = no; then
- save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
- AC_MSG_CHECKING([for $sgemm in -framework vecLib])
- AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
- AC_MSG_RESULT($ax_blas_ok)
- LIBS="$save_LIBS"
-fi
-
-# BLAS in Alpha CXML library?
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"])
-fi
-
-# BLAS in Alpha DXML library? (now called CXML, see above)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"])
-fi
-
-# BLAS in Sun Performance library?
-if test $ax_blas_ok = no; then
- if test "x$GCC" != xyes; then # only works with Sun CC
- AC_CHECK_LIB(sunmath, acosp,
- [AC_CHECK_LIB(sunperf, $sgemm,
- [BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
- ax_blas_ok=yes],[],[-lsunmath])])
- fi
-fi
-
-# BLAS in SCSL library? (SGI/Cray Scientific Library)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"])
-fi
-
-# BLAS in SGIMATH library?
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(complib.sgimath, $sgemm,
- [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
-fi
-
-# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(blas, $sgemm,
- [AC_CHECK_LIB(essl, $sgemm,
- [ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
- [], [-lblas $FLIBS])])
-fi
-
-# Generic BLAS library?
-if test $ax_blas_ok = no; then
- AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"])
-fi
-
-AC_SUBST(BLAS_LIBS)
-
-LIBS="$ax_blas_save_LIBS"
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x"$ax_blas_ok" = xyes; then
- ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
- :
-else
- ax_blas_ok=no
- $2
-fi
-])dnl AX_BLAS
-
diff --git a/m4/ax_boost_base.m4 b/m4/ax_boost_base.m4
deleted file mode 100644
index b8ffb03f6..000000000
--- a/m4/ax_boost_base.m4
+++ /dev/null
@@ -1,286 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_boost_base.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_BOOST_BASE([MINIMUM-VERSION], [ACTION-IF-FOUND], [ACTION-IF-NOT-FOUND])
-#
-# DESCRIPTION
-#
-# Test for the Boost C++ libraries of a particular version (or newer)
-#
-# If no path to the installed boost library is given the macro searchs
-# under /usr, /usr/local, /opt and /opt/local and evaluates the
-# $BOOST_ROOT environment variable. Further documentation is available at
-# <http://randspringer.de/boost/index.html>.
-#
-# This macro calls:
-#
-# AC_SUBST(BOOST_CPPFLAGS) / AC_SUBST(BOOST_LDFLAGS)
-#
-# And sets:
-#
-# HAVE_BOOST
-#
-# LICENSE
-#
-# Copyright (c) 2008 Thomas Porschberg <thomas@randspringer.de>
-# Copyright (c) 2009 Peter Adolphs
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 26
-
-AC_DEFUN([AX_BOOST_BASE],
-[
-AC_ARG_WITH([boost],
- [AS_HELP_STRING([--with-boost@<:@=ARG@:>@],
- [use Boost library from a standard location (ARG=yes),
- from the specified location (ARG=<path>),
- or disable it (ARG=no)
- @<:@ARG=yes@:>@ ])],
- [
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ac_boost_path=""
- else
- want_boost="yes"
- ac_boost_path="$withval"
- fi
- ],
- [want_boost="yes"])
-
-
-AC_ARG_WITH([boost-libdir],
- AS_HELP_STRING([--with-boost-libdir=LIB_DIR],
- [Force given directory for boost libraries. Note that this will override library path detection, so use this parameter only if default library detection fails and you know exactly where your boost libraries are located.]),
- [
- if test -d "$withval"
- then
- ac_boost_lib_path="$withval"
- else
- AC_MSG_ERROR(--with-boost-libdir expected directory name)
- fi
- ],
- [ac_boost_lib_path=""]
-)
-
-if test "x$want_boost" = "xyes"; then
- boost_lib_version_req=ifelse([$1], ,1.20.0,$1)
- boost_lib_version_req_shorten=`expr $boost_lib_version_req : '\([[0-9]]*\.[[0-9]]*\)'`
- boost_lib_version_req_major=`expr $boost_lib_version_req : '\([[0-9]]*\)'`
- boost_lib_version_req_minor=`expr $boost_lib_version_req : '[[0-9]]*\.\([[0-9]]*\)'`
- boost_lib_version_req_sub_minor=`expr $boost_lib_version_req : '[[0-9]]*\.[[0-9]]*\.\([[0-9]]*\)'`
- if test "x$boost_lib_version_req_sub_minor" = "x" ; then
- boost_lib_version_req_sub_minor="0"
- fi
- WANT_BOOST_VERSION=`expr $boost_lib_version_req_major \* 100000 \+ $boost_lib_version_req_minor \* 100 \+ $boost_lib_version_req_sub_minor`
- AC_MSG_CHECKING(for boostlib >= $boost_lib_version_req)
- succeeded=no
-
- dnl On 64-bit systems check for system libraries in both lib64 and lib.
- dnl The former is specified by FHS, but e.g. Debian does not adhere to
- dnl this (as it rises problems for generic multi-arch support).
- dnl The last entry in the list is chosen by default when no libraries
- dnl are found, e.g. when only header-only libraries are installed!
- libsubdirs="lib"
- ax_arch=`uname -m`
- case $ax_arch in
- x86_64)
- libsubdirs="lib64 libx32 lib lib64"
- ;;
- ppc64|s390x|sparc64|aarch64|ppc64le)
- libsubdirs="lib64 lib lib64 ppc64le"
- ;;
- esac
-
- dnl allow for real multi-arch paths e.g. /usr/lib/x86_64-linux-gnu. Give
- dnl them priority over the other paths since, if libs are found there, they
- dnl are almost assuredly the ones desired.
- AC_REQUIRE([AC_CANONICAL_HOST])
- libsubdirs="lib/${host_cpu}-${host_os} $libsubdirs"
-
- case ${host_cpu} in
- i?86)
- libsubdirs="lib/i386-${host_os} $libsubdirs"
- ;;
- esac
-
- dnl first we check the system location for boost libraries
- dnl this location ist chosen if boost libraries are installed with the --layout=system option
- dnl or if you install boost with RPM
- if test "$ac_boost_path" != ""; then
- BOOST_CPPFLAGS="-I$ac_boost_path/include"
- for ac_boost_path_tmp in $libsubdirs; do
- if test -d "$ac_boost_path"/"$ac_boost_path_tmp" ; then
- BOOST_LDFLAGS="-L$ac_boost_path/$ac_boost_path_tmp"
- break
- fi
- done
- elif test "$cross_compiling" != yes; then
- for ac_boost_path_tmp in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_boost_path_tmp/include/boost" && test -r "$ac_boost_path_tmp/include/boost"; then
- for libsubdir in $libsubdirs ; do
- if ls "$ac_boost_path_tmp/$libsubdir/libboost_"* >/dev/null 2>&1 ; then break; fi
- done
- BOOST_LDFLAGS="-L$ac_boost_path_tmp/$libsubdir"
- BOOST_CPPFLAGS="-I$ac_boost_path_tmp/include"
- break;
- fi
- done
- fi
-
- dnl overwrite ld flags if we have required special directory with
- dnl --with-boost-libdir parameter
- if test "$ac_boost_lib_path" != ""; then
- BOOST_LDFLAGS="-L$ac_boost_lib_path"
- fi
-
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- AC_REQUIRE([AC_PROG_CXX])
- AC_LANG_PUSH(C++)
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[
- @%:@include <boost/version.hpp>
- ]], [[
- #if BOOST_VERSION >= $WANT_BOOST_VERSION
- // Everything is okay
- #else
- # error Boost version is too old
- #endif
- ]])],[
- AC_MSG_RESULT(yes)
- succeeded=yes
- found_system=yes
- ],[
- ])
- AC_LANG_POP([C++])
-
-
-
- dnl if we found no boost with system layout we search for boost libraries
- dnl built and installed without the --layout=system option or for a staged(not installed) version
- if test "x$succeeded" != "xyes"; then
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
- BOOST_CPPFLAGS=
- BOOST_LDFLAGS=
- _version=0
- if test "$ac_boost_path" != ""; then
- if test -d "$ac_boost_path" && test -r "$ac_boost_path"; then
- for i in `ls -d $ac_boost_path/include/boost-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_boost_path##" | sed 's/\/include\/boost-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- fi
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BOOST_CPPFLAGS="-I$ac_boost_path/include/boost-$VERSION_UNDERSCORE"
- done
- dnl if nothing found search for layout used in Windows distributions
- if test -z "$BOOST_CPPFLAGS"; then
- if test -d "$ac_boost_path/boost" && test -r "$ac_boost_path/boost"; then
- BOOST_CPPFLAGS="-I$ac_boost_path"
- fi
- fi
- fi
- else
- if test "$cross_compiling" != yes; then
- for ac_boost_path in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_boost_path" && test -r "$ac_boost_path"; then
- for i in `ls -d $ac_boost_path/include/boost-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_boost_path##" | sed 's/\/include\/boost-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- best_path=$ac_boost_path
- fi
- done
- fi
- done
-
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BOOST_CPPFLAGS="-I$best_path/include/boost-$VERSION_UNDERSCORE"
- if test "$ac_boost_lib_path" = ""; then
- for libsubdir in $libsubdirs ; do
- if ls "$best_path/$libsubdir/libboost_"* >/dev/null 2>&1 ; then break; fi
- done
- BOOST_LDFLAGS="-L$best_path/$libsubdir"
- fi
- fi
-
- if test "x$BOOST_ROOT" != "x"; then
- for libsubdir in $libsubdirs ; do
- if ls "$BOOST_ROOT/stage/$libsubdir/libboost_"* >/dev/null 2>&1 ; then break; fi
- done
- if test -d "$BOOST_ROOT" && test -r "$BOOST_ROOT" && test -d "$BOOST_ROOT/stage/$libsubdir" && test -r "$BOOST_ROOT/stage/$libsubdir"; then
- version_dir=`expr //$BOOST_ROOT : '.*/\(.*\)'`
- stage_version=`echo $version_dir | sed 's/boost_//' | sed 's/_/./g'`
- stage_version_shorten=`expr $stage_version : '\([[0-9]]*\.[[0-9]]*\)'`
- V_CHECK=`expr $stage_version_shorten \>\= $_version`
- if test "$V_CHECK" = "1" -a "$ac_boost_lib_path" = "" ; then
- AC_MSG_NOTICE(We will use a staged boost library from $BOOST_ROOT)
- BOOST_CPPFLAGS="-I$BOOST_ROOT"
- BOOST_LDFLAGS="-L$BOOST_ROOT/stage/$libsubdir"
- fi
- fi
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- AC_LANG_PUSH(C++)
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[
- @%:@include <boost/version.hpp>
- ]], [[
- #if BOOST_VERSION >= $WANT_BOOST_VERSION
- // Everything is okay
- #else
- # error Boost version is too old
- #endif
- ]])],[
- AC_MSG_RESULT(yes)
- succeeded=yes
- found_system=yes
- ],[
- ])
- AC_LANG_POP([C++])
- fi
-
- if test "$succeeded" != "yes" ; then
- if test "$_version" = "0" ; then
- AC_MSG_NOTICE([[We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation.]])
- else
- AC_MSG_NOTICE([Your boost libraries seems to old (version $_version).])
- fi
- # execute ACTION-IF-NOT-FOUND (if present):
- ifelse([$3], , :, [$3])
- else
- AC_SUBST(BOOST_CPPFLAGS)
- AC_SUBST(BOOST_LDFLAGS)
- AC_DEFINE(HAVE_BOOST,,[define if the Boost library is available])
- # execute ACTION-IF-FOUND (if present):
- ifelse([$2], , :, [$2])
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
-fi
-
-])
-
diff --git a/m4/ax_boost_iostreams.m4 b/m4/ax_boost_iostreams.m4
deleted file mode 100644
index b4e970be0..000000000
--- a/m4/ax_boost_iostreams.m4
+++ /dev/null
@@ -1,119 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_boost_iostreams.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_BOOST_IOSTREAMS
-#
-# DESCRIPTION
-#
-# Test for IOStreams library from the Boost C++ libraries. The macro
-# requires a preceding call to AX_BOOST_BASE. Further documentation is
-# available at <http://randspringer.de/boost/index.html>.
-#
-# This macro calls:
-#
-# AC_SUBST(BOOST_IOSTREAMS_LIB)
-#
-# And sets:
-#
-# HAVE_BOOST_IOSTREAMS
-#
-# LICENSE
-#
-# Copyright (c) 2008 Thomas Porschberg <thomas@randspringer.de>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 20
-
-AC_DEFUN([AX_BOOST_IOSTREAMS],
-[
- AC_ARG_WITH([boost-iostreams],
- AS_HELP_STRING([--with-boost-iostreams@<:@=special-lib@:>@],
- [use the IOStreams library from boost - it is possible to specify a certain library for the linker
- e.g. --with-boost-iostreams=boost_iostreams-gcc-mt-d-1_33_1 ]),
- [
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ax_boost_user_iostreams_lib=""
- else
- want_boost="yes"
- ax_boost_user_iostreams_lib="$withval"
- fi
- ],
- [want_boost="yes"]
- )
-
- if test "x$want_boost" = "xyes"; then
- AC_REQUIRE([AC_PROG_CC])
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- AC_CACHE_CHECK(whether the Boost::IOStreams library is available,
- ax_cv_boost_iostreams,
- [AC_LANG_PUSH([C++])
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[@%:@include <boost/iostreams/filtering_stream.hpp>
- @%:@include <boost/range/iterator_range.hpp>
- ]],
- [[std::string input = "Hello World!";
- namespace io = boost::iostreams;
- io::filtering_istream in(boost::make_iterator_range(input));
- return 0;
- ]])],
- ax_cv_boost_iostreams=yes, ax_cv_boost_iostreams=no)
- AC_LANG_POP([C++])
- ])
- if test "x$ax_cv_boost_iostreams" = "xyes"; then
- AC_DEFINE(HAVE_BOOST_IOSTREAMS,,[define if the Boost::IOStreams library is available])
- BOOSTLIBDIR=`echo $BOOST_LDFLAGS | sed -e 's/@<:@^\/@:>@*//'`
- if test "x$ax_boost_user_iostreams_lib" = "x"; then
- for libextension in `ls $BOOSTLIBDIR/libboost_iostreams*.so* $BOOSTLIBDIR/libboost_iostream*.dylib* $BOOSTLIBDIR/libboost_iostreams*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_iostreams.*\)\.so.*$;\1;' -e 's;^lib\(boost_iostream.*\)\.dylib.*$;\1;' -e 's;^lib\(boost_iostreams.*\)\.a.*$;\1;'` ; do
- ax_lib=${libextension}
- AC_CHECK_LIB($ax_lib, exit,
- [BOOST_IOSTREAMS_LIB="-l$ax_lib"; AC_SUBST(BOOST_IOSTREAMS_LIB) link_iostreams="yes"; break],
- [link_iostreams="no"])
- done
- if test "x$link_iostreams" != "xyes"; then
- for libextension in `ls $BOOSTLIBDIR/boost_iostreams*.dll* $BOOSTLIBDIR/boost_iostreams*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_iostreams.*\)\.dll.*$;\1;' -e 's;^\(boost_iostreams.*\)\.a.*$;\1;'` ; do
- ax_lib=${libextension}
- AC_CHECK_LIB($ax_lib, exit,
- [BOOST_IOSTREAMS_LIB="-l$ax_lib"; AC_SUBST(BOOST_IOSTREAMS_LIB) link_iostreams="yes"; break],
- [link_iostreams="no"])
- done
- fi
-
- else
- for ax_lib in $ax_boost_user_iostreams_lib boost_iostreams-$ax_boost_user_iostreams_lib; do
- AC_CHECK_LIB($ax_lib, main,
- [BOOST_IOSTREAMS_LIB="-l$ax_lib"; AC_SUBST(BOOST_IOSTREAMS_LIB) link_iostreams="yes"; break],
- [link_iostreams="no"])
- done
-
- fi
- if test "x$ax_lib" = "x"; then
- echo "Could not find a version of the library!"
- exit 202
- fi
- if test "x$link_iostreams" != "xyes"; then
- echo "Could not link against $ax_lib !"
- exit 202
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
- fi
-])
-
diff --git a/m4/ax_boost_program_options.m4 b/m4/ax_boost_program_options.m4
deleted file mode 100644
index e508ea378..000000000
--- a/m4/ax_boost_program_options.m4
+++ /dev/null
@@ -1,110 +0,0 @@
- # ============================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_boost_program_options.html
-# ============================================================================
-#
-# SYNOPSIS
-#
-# AX_BOOST_PROGRAM_OPTIONS
-#
-# DESCRIPTION
-#
-# Test for program options library from the Boost C++ libraries. The macro
-# requires a preceding call to AX_BOOST_BASE. Further documentation is
-# available at <http://randspringer.de/boost/index.html>.
-#
-# This macro calls:
-#
-# AC_SUBST(BOOST_PROGRAM_OPTIONS_LIB)
-#
-# And sets:
-#
-# HAVE_BOOST_PROGRAM_OPTIONS
-#
-# LICENSE
-#
-# Copyright (c) 2009 Thomas Porschberg <thomas@randspringer.de>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 24
-
-AC_DEFUN([AX_BOOST_PROGRAM_OPTIONS],
-[
- AC_ARG_WITH([boost-program-options],
- AS_HELP_STRING([--with-boost-program-options@<:@=special-lib@:>@],
- [use the program options library from boost - it is possible to specify a certain library for the linker
- e.g. --with-boost-program-options=boost_program_options-gcc-mt-1_33_1 ]),
- [
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ax_boost_user_program_options_lib=""
- else
- want_boost="yes"
- ax_boost_user_program_options_lib="$withval"
- fi
- ],
- [want_boost="yes"]
- )
-
- if test "x$want_boost" = "xyes"; then
- AC_REQUIRE([AC_PROG_CC])
- export want_boost
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
- AC_CACHE_CHECK([whether the Boost::Program_Options library is available],
- ax_cv_boost_program_options,
- [AC_LANG_PUSH(C++)
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[@%:@include <boost/program_options/errors.hpp>
- ]],
- [[boost::program_options::error err("Error message");
- return 0;]])],
- ax_cv_boost_program_options=yes, ax_cv_boost_program_options=no)
- AC_LANG_POP([C++])
- ])
- if test "$ax_cv_boost_program_options" = yes; then
- AC_DEFINE(HAVE_BOOST_PROGRAM_OPTIONS,,[define if the Boost::PROGRAM_OPTIONS library is available])
- BOOSTLIBDIR=`echo $BOOST_LDFLAGS | sed -e 's/@<:@^\/@:>@*//'`
- if test "x$ax_boost_user_program_options_lib" = "x"; then
- for libextension in `ls $BOOSTLIBDIR/libboost_program_options*.so* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_program_options.*\)\.so.*$;\1;'` `ls $BOOSTLIBDIR/libboost_program_options*.dylib* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_program_options.*\)\.dylib.*$;\1;'` `ls $BOOSTLIBDIR/libboost_program_options*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_program_options.*\)\.a.*$;\1;'` ; do
- ax_lib=${libextension}
- AC_CHECK_LIB($ax_lib, exit,
- [BOOST_PROGRAM_OPTIONS_LIB="-l$ax_lib"; AC_SUBST(BOOST_PROGRAM_OPTIONS_LIB) link_program_options="yes"; break],
- [link_program_options="no"])
- done
- if test "x$link_program_options" != "xyes"; then
- for libextension in `ls $BOOSTLIBDIR/boost_program_options*.dll* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_program_options.*\)\.dll.*$;\1;'` `ls $BOOSTLIBDIR/boost_program_options*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_program_options.*\)\.a.*$;\1;'` ; do
- ax_lib=${libextension}
- AC_CHECK_LIB($ax_lib, exit,
- [BOOST_PROGRAM_OPTIONS_LIB="-l$ax_lib"; AC_SUBST(BOOST_PROGRAM_OPTIONS_LIB) link_program_options="yes"; break],
- [link_program_options="no"])
- done
- fi
- else
- for ax_lib in $ax_boost_user_program_options_lib boost_program_options-$ax_boost_user_program_options_lib; do
- AC_CHECK_LIB($ax_lib, main,
- [BOOST_PROGRAM_OPTIONS_LIB="-l$ax_lib"; AC_SUBST(BOOST_PROGRAM_OPTIONS_LIB) link_program_options="yes"; break],
- [link_program_options="no"])
- done
- fi
- if test "x$ax_lib" = "x"; then
- echo "Could not find a version of the library!"
- exit 202
- fi
- if test "x$link_program_options" != "xyes"; then
- echo "Could not link against [$ax_lib] !"
- exit 202
- fi
- fi
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
- fi
-])
diff --git a/m4/ax_boost_unit_test_framework.m4 b/m4/ax_boost_unit_test_framework.m4
deleted file mode 100644
index ff3e8b0f9..000000000
--- a/m4/ax_boost_unit_test_framework.m4
+++ /dev/null
@@ -1,139 +0,0 @@
-# ================================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_boost_unit_test_framework.html
-# ================================================================================
-#
-# SYNOPSIS
-#
-# AX_BOOST_UNIT_TEST_FRAMEWORK
-#
-# DESCRIPTION
-#
-# Test for Unit_Test_Framework library from the Boost C++ libraries. The
-# macro requires a preceding call to AX_BOOST_BASE. Further documentation
-# is available at <http://randspringer.de/boost/index.html>.
-#
-# This macro calls:
-#
-# AC_SUBST(BOOST_UNIT_TEST_FRAMEWORK_LIB)
-#
-# And sets:
-#
-# HAVE_BOOST_UNIT_TEST_FRAMEWORK
-#
-# LICENSE
-#
-# Copyright (c) 2008 Thomas Porschberg <thomas@randspringer.de>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 19
-
-AC_DEFUN([AX_BOOST_UNIT_TEST_FRAMEWORK],
-[
- AC_ARG_WITH([boost-unit-test-framework],
- AS_HELP_STRING([--with-boost-unit-test-framework@<:@=special-lib@:>@],
- [use the Unit_Test_Framework library from boost - it is possible to specify a certain library for the linker
- e.g. --with-boost-unit-test-framework=boost_unit_test_framework-gcc ]),
- [
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ax_boost_user_unit_test_framework_lib=""
- else
- want_boost="yes"
- ax_boost_user_unit_test_framework_lib="$withval"
- fi
- ],
- [want_boost="yes"]
- )
-
- if test "x$want_boost" = "xyes"; then
- AC_REQUIRE([AC_PROG_CC])
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- AC_CACHE_CHECK(whether the Boost::Unit_Test_Framework library is available,
- ax_cv_boost_unit_test_framework,
- [AC_LANG_PUSH([C++])
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[@%:@include <boost/test/unit_test.hpp>]],
- [[using boost::unit_test::test_suite;
- test_suite* test= BOOST_TEST_SUITE( "Unit test example 1" ); return 0;]])],
- ax_cv_boost_unit_test_framework=yes, ax_cv_boost_unit_test_framework=no)
- AC_LANG_POP([C++])
- ])
- if test "x$ax_cv_boost_unit_test_framework" = "xyes"; then
- AC_DEFINE(HAVE_BOOST_UNIT_TEST_FRAMEWORK,,[define if the Boost::Unit_Test_Framework library is available])
- BOOSTLIBDIR=`echo $BOOST_LDFLAGS | sed -e 's/@<:@^\/@:>@*//'`
-
- if test "x$ax_boost_user_unit_test_framework_lib" = "x"; then
- saved_ldflags="${LDFLAGS}"
- for monitor_library in `ls $BOOSTLIBDIR/libboost_unit_test_framework*.so* $BOOSTLIBDIR/libboost_unit_test_framework*.dylib* $BOOSTLIBDIR/libboost_unit_test_framework*.a* 2>/dev/null` ; do
- if test -r $monitor_library ; then
- libextension=`echo $monitor_library | sed 's,.*/,,' | sed -e 's;^lib\(boost_unit_test_framework.*\)\.so.*$;\1;' -e 's;^lib\(boost_unit_test_framework.*\)\.dylib.*$;\1;' -e 's;^lib\(boost_unit_test_framework.*\)\.a.*$;\1;'`
- ax_lib=${libextension}
- link_unit_test_framework="yes"
- else
- link_unit_test_framework="no"
- fi
-
- if test "x$link_unit_test_framework" = "xyes"; then
- BOOST_UNIT_TEST_FRAMEWORK_LIB="-l$ax_lib"
- AC_SUBST(BOOST_UNIT_TEST_FRAMEWORK_LIB)
- break
- fi
- done
- if test "x$link_unit_test_framework" != "xyes"; then
- for libextension in `ls $BOOSTLIBDIR/boost_unit_test_framework*.dll* $BOOSTLIBDIR/boost_unit_test_framework*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_unit_test_framework.*\)\.dll.*$;\1;' -e 's;^\(boost_unit_test_framework.*\)\.a.*$;\1;'` ; do
- ax_lib=${libextension}
- AC_CHECK_LIB($ax_lib, exit,
- [BOOST_UNIT_TEST_FRAMEWORK_LIB="-l$ax_lib"; AC_SUBST(BOOST_UNIT_TEST_FRAMEWORK_LIB) link_unit_test_framework="yes"; break],
- [link_unit_test_framework="no"])
- done
- fi
- else
- link_unit_test_framework="no"
- saved_ldflags="${LDFLAGS}"
- for ax_lib in boost_unit_test_framework-$ax_boost_user_unit_test_framework_lib $ax_boost_user_unit_test_framework_lib ; do
- if test "x$link_unit_test_framework" = "xyes"; then
- break;
- fi
- for unittest_library in `ls $BOOSTLIBDIR/lib${ax_lib}.so* $BOOSTLIBDIR/lib${ax_lib}.a* 2>/dev/null` ; do
- if test -r $unittest_library ; then
- libextension=`echo $unittest_library | sed 's,.*/,,' | sed -e 's;^lib\(boost_unit_test_framework.*\)\.so.*$;\1;' -e 's;^lib\(boost_unit_test_framework.*\)\.a*$;\1;'`
- ax_lib=${libextension}
- link_unit_test_framework="yes"
- else
- link_unit_test_framework="no"
- fi
-
- if test "x$link_unit_test_framework" = "xyes"; then
- BOOST_UNIT_TEST_FRAMEWORK_LIB="-l$ax_lib"
- AC_SUBST(BOOST_UNIT_TEST_FRAMEWORK_LIB)
- break
- fi
- done
- done
- fi
- if test "x$ax_lib" = "x"; then
- echo "Could not find a version of the library!"
- exit 202
- fi
- if test "x$link_unit_test_framework" != "xyes"; then
- echo "Could not link against $ax_lib !"
- exit 202
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
- fi
-])
diff --git a/m4/ax_check_compiler_flags.m4 b/m4/ax_check_compiler_flags.m4
deleted file mode 100644
index 35bfd2a5a..000000000
--- a/m4/ax_check_compiler_flags.m4
+++ /dev/null
@@ -1,76 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_check_compiler_flags.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_CHECK_COMPILER_FLAGS(FLAGS, [ACTION-SUCCESS], [ACTION-FAILURE])
-#
-# DESCRIPTION
-#
-# Check whether the given compiler FLAGS work with the current language's
-# compiler, or whether they give an error. (Warnings, however, are
-# ignored.)
-#
-# ACTION-SUCCESS/ACTION-FAILURE are shell commands to execute on
-# success/failure.
-#
-# LICENSE
-#
-# Copyright (c) 2009 Steven G. Johnson <stevenj@alum.mit.edu>
-# Copyright (c) 2009 Matteo Frigo
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 9
-
-AC_DEFUN([AX_CHECK_COMPILER_FLAGS],
-[AC_PREREQ(2.59) dnl for _AC_LANG_PREFIX
-AC_MSG_CHECKING([whether _AC_LANG compiler accepts $1])
-dnl Some hackery here since AC_CACHE_VAL can't handle a non-literal varname:
-AS_LITERAL_IF([$1],
- [AC_CACHE_VAL(AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1]), [
- ax_save_FLAGS=$[]_AC_LANG_PREFIX[]FLAGS
- _AC_LANG_PREFIX[]FLAGS="$1"
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM()],
- AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1])=yes,
- AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1])=no)
- _AC_LANG_PREFIX[]FLAGS=$ax_save_FLAGS])],
- [ax_save_FLAGS=$[]_AC_LANG_PREFIX[]FLAGS
- _AC_LANG_PREFIX[]FLAGS="$1"
- AC_COMPILE_IFELSE([AC_LANG_PROGRAM()],
- eval AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1])=yes,
- eval AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1])=no)
- _AC_LANG_PREFIX[]FLAGS=$ax_save_FLAGS])
-eval ax_check_compiler_flags=$AS_TR_SH(ax_cv_[]_AC_LANG_ABBREV[]_flags_[$1])
-AC_MSG_RESULT($ax_check_compiler_flags)
-if test "x$ax_check_compiler_flags" = xyes; then
- m4_default([$2], :)
-else
- m4_default([$3], :)
-fi
-])dnl AX_CHECK_COMPILER_FLAGS
diff --git a/m4/ax_cuda.m4 b/m4/ax_cuda.m4
deleted file mode 100644
index 17e2f0683..000000000
--- a/m4/ax_cuda.m4
+++ /dev/null
@@ -1,84 +0,0 @@
-# -*- mode: autoconf -*-
-#
-# AX_OPENCL
-#
-# Check for an OpenCL implementation. If CL is found, _OPENCL is defined and
-# the required compiler and linker flags are included in the output variables
-# "CL_CFLAGS" and "CL_LIBS", respectively. If no usable CL implementation is
-# found, "no_cl" is set to "yes".
-#
-# If the header "CL/OpenCL.h" is found, "HAVE_CL_OPENCL_H" is defined. If the
-# header "OpenCL/OpenCL.h" is found, HAVE_OPENCL_OPENCL_H is defined. These
-# preprocessor definitions may not be mutually exclusive.
-#
-# Based on AX_CHECK_GL, version: 2.4 author: Braden McDaniel
-# <braden@endoframe.com>
-#
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
-# 02110-1301, USA.
-#
-# As a special exception, the you may copy, distribute and modify the
-# configure scripts that are the output of Autoconf when processing
-# the Macro. You need not follow the terms of the GNU General Public
-# License when using or distributing such scripts.
-#
-AC_DEFUN([AX_CUDA],
-[AC_REQUIRE([AC_CANONICAL_HOST])dnl
-
-# Search nvcc compiler
-AC_CHECK_PROG([NVCC_EXIST],[nvcc],["yes"],["no"])
-AS_IF([test "x$NVCC_EXIST" = "xno"],[],[
- NVCC=`which nvcc`
-
- # Set CUDA_CFLAGS to $NVCC, where substring "bin/nvcc"
- # is substituted by "include".
- CUDA_CFLAGS=" ${NVCC%bin//nvcc}"
- CUDA_CFLAGS=" ${CUDA_CFLAGS%bin/nvcc}"
- CUDA_CFLAGS=" -I${CUDA_CFLAGS}include"
-
- #Set CUDA_CFLAGS to $NVCC, where substring "bin/nvcc"
- #is substituted by "lib".
- CUDA_LIBS="${NVCC%bin//nvcc}"
- CUDA_LIBS="${CUDA_LIBS%bin/nvcc}"
- CUDA_PATH=$CUDA_LIBS
- CUDA_LIBS=" -L${CUDA_LIBS}lib"
-
- # If $build_cpu contains "_64", append "64" to CUDA_LIBS
- AS_IF([echo $build_cpu | grep -q "_64"],
- [
- AS_IF([ test -d $CUDA_PATH/lib64 ], [ CUDA_LIBS+="64" ], [])
- # Be carefull the return code 0 mean true return code 1 mean false
- AS_IF([ command -v bumblebeed >/dev/null ], [ CUDA_LIBS+=" -L/usr/lib64/nvidia-bumblebee/ " ],
- [
- echo "bumblebee, NVIDIA optimus, not found"
- ])
- AS_IF([ test -d /usr/local/cuda/lib64 ], [ CUDA_LIBS+=" -L/usr/local/cuda/lib64 " ],
- [
- AS_IF([ test -d /usr/local/cuda/lib ],[ CUDA_LIBS+=" -L/usr/local/cuda/lib " ])
- ])
- ])
-
- # Append " -lcuda -lcudart" to CUDA_LIBS
- CUDA_LIBS+=" -lcuda -lcudart"
-
- # Make variables available in Makefile.am
- AC_SUBST([CUDA_CFLAGS])
- AC_SUBST([CUDA_LIBS])
- echo $NVCC
- AC_SUBST([NVCC])
- AC_DEFINE([NVCC],[],[NVCC compiling])
-])dnl
-
-])dnl
diff --git a/m4/ax_eigen.m4 b/m4/ax_eigen.m4
deleted file mode 100644
index c59846ad3..000000000
--- a/m4/ax_eigen.m4
+++ /dev/null
@@ -1,87 +0,0 @@
-#
-# AX_EIGEN([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-#
-# DESCRIPTION
-#
-# This macro looks for EIGEN library (see http://www.netlib.org/lapack/)
-# On success, it sets the EIGEN_INCLUDE output variable to hold the
-# requisite includes.
-#
-# The user may also use --with-eigen=<include> in order to use some specific
-# Eigen library.
-#
-# ACTION-IF-FOUND is a list of shell commands to run if a Eigen library
-# is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it
-# is not found. If ACTION-IF-FOUND is not specified, the default action
-# will define HAVE_EIGEN.
-#
-# LICENSE
-#
-# Copyright (c) 2009 Steven G. Johnson <stevenj@alum.mit.edu>
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 1
-
-AU_ALIAS([ACX_EIGEN], [AX_EIGEN])
-AC_DEFUN([AX_EIGEN], [
-ax_eigen_ok=no
-
-AC_ARG_WITH(eigen,
- [AS_HELP_STRING([--with-eigen=directory], [use Eigen directory])],[
- EIGEN_INCLUDE="-I$with_eigen/include"
- ])
-
-# First, check EIGEN_INCLUDE environment variable
-if test "x$EIGEN_INCLUDE" != x; then
- old_CXXFLAGS="$CXXFLAGS"
- AC_LANG_PUSH([C++])
- CXXFLAGS+=" -I${withval} -DEIGEN"
-
- # Check for the EIGEN header files
- AC_CHECK_HEADERS([Eigen/Dense Eigen/LU],[ax_eigen_ok=yes],[ax_eigen_ok=no])
- AC_LANG_POP()
- CFLAGS="$old_CFLAGS"
-else
- old_CXXFLAGS="$CXXFLAGS"
- CXXFLAGS+=' -I/usr/include/eigen3 -DEIGEN'
- AC_CHECK_HEADERS([Eigen/Dense Eigen/LU],[ax_eigen_ok=yes],[ax_eigen_ok=no])
- CFLAGS="$old_CFLAGS"
-fi
-
-AC_SUBST(EIGEN_INCLUDE)
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x"$ax_eigen_ok" = xyes; then
- ifelse([$1],,AC_DEFINE(HAVE_EIGEN,1,[Define if you have EIGEN library.]),[$1])
- :
-else
- ax_eigen_ok=no
- $2
-fi
-])dnl AX_EIGEN
-
diff --git a/m4/ax_gcc_archflag.m4 b/m4/ax_gcc_archflag.m4
deleted file mode 100644
index e918ece17..000000000
--- a/m4/ax_gcc_archflag.m4
+++ /dev/null
@@ -1,220 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_gcc_archflag.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_GCC_ARCHFLAG([PORTABLE?], [ACTION-SUCCESS], [ACTION-FAILURE])
-#
-# DESCRIPTION
-#
-# This macro tries to guess the "native" arch corresponding to the target
-# architecture for use with gcc's -march=arch or -mtune=arch flags. If
-# found, the cache variable $ax_cv_gcc_archflag is set to this flag and
-# ACTION-SUCCESS is executed; otherwise $ax_cv_gcc_archflag is is set to
-# "unknown" and ACTION-FAILURE is executed. The default ACTION-SUCCESS is
-# to add $ax_cv_gcc_archflag to the end of $CFLAGS.
-#
-# PORTABLE? should be either [yes] (default) or [no]. In the former case,
-# the flag is set to -mtune (or equivalent) so that the architecture is
-# only used for tuning, but the instruction set used is still portable. In
-# the latter case, the flag is set to -march (or equivalent) so that
-# architecture-specific instructions are enabled.
-#
-# The user can specify --with-gcc-arch=<arch> in order to override the
-# macro's choice of architecture, or --without-gcc-arch to disable this.
-#
-# When cross-compiling, or if $CC is not gcc, then ACTION-FAILURE is
-# called unless the user specified --with-gcc-arch manually.
-#
-# Requires macros: AX_CHECK_COMPILER_FLAGS, AX_GCC_X86_CPUID
-#
-# (The main emphasis here is on recent CPUs, on the principle that doing
-# high-performance computing on old hardware is uncommon.)
-#
-# LICENSE
-#
-# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-# Copyright (c) 2008 Matteo Frigo
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 8
-
-AC_DEFUN([AX_GCC_ARCHFLAG],
-[AC_REQUIRE([AC_PROG_CC])
-AC_REQUIRE([AC_CANONICAL_HOST])
-
-AC_ARG_WITH(gcc-arch, [AS_HELP_STRING([--with-gcc-arch=<arch>], [use architecture <arch> for gcc -march/-mtune, instead of guessing])],
- ax_gcc_arch=$withval, ax_gcc_arch=yes)
-
-AC_MSG_CHECKING([for gcc architecture flag])
-AC_MSG_RESULT([])
-AC_CACHE_VAL(ax_cv_gcc_archflag,
-[
-ax_cv_gcc_archflag="unknown"
-
-if test "$GCC" = yes; then
-
-if test "x$ax_gcc_arch" = xyes; then
-ax_gcc_arch=""
-if test "$cross_compiling" = no; then
-case $host_cpu in
- i[[3456]]86*|x86_64*) # use cpuid codes, in part from x86info-1.7 by D. Jones
- AX_GCC_X86_CPUID(0)
- AX_GCC_X86_CPUID(1)
- case $ax_cv_gcc_x86_cpuid_0 in
- *:756e6547:*:*) # Intel
- case $ax_cv_gcc_x86_cpuid_1 in
- *5[[48]]?:*:*:*) ax_gcc_arch="pentium-mmx pentium" ;;
- *5??:*:*:*) ax_gcc_arch=pentium ;;
- 206??:*:*:*) ax_gcc_arch="corei7 native nocona core2 prescott pentium4 pentiumpro";break;;
- 106a?:*:*:*) ax_gcc_arch="corei7 native nocona core2 prescott pentium4 pentiumpro";break;;
- 106e?:*:*:*) ax_gcc_arch="corei7 native nocona core2 prescott pentium4 pentiumpro";break;;
- *6[[520]]?:*:*:*) ax_gcc_arch="i7core nocona core2 prescott pentium4 pentiumpro" ;;
- *6[[3456]]?:*:*:*) ax_gcc_arch="pentium2 pentiumpro" ;;
- *6a?:*[[01]]:*:*) ax_gcc_arch="pentium2 pentiumpro" ;;
- *6a?:*[[234]]:*:*) ax_gcc_arch="pentium3 pentiumpro" ;;
- *6[[9d]]?:*:*:*) ax_gcc_arch="pentium-m pentium3 pentiumpro" ;;
- *6[[78b]]?:*:*:*) ax_gcc_arch="pentium3 pentiumpro" ;;
- *6f?:*:*:*) ax_gcc_arch="core2 native pentium-m pentium3 pentiumpro" ;;
- *6??:*:*:*) ax_gcc_arch=pentiumpro ;;
- *f3[[347]]:*:*:*|*f4[1347]:*:*:*)
- case $host_cpu in
- x86_64*) ax_gcc_arch="nocona pentium4 pentiumpro" ;;
- *) ax_gcc_arch="prescott pentium4 pentiumpro" ;;
- esac ;;
- *f??:*:*:*) ax_gcc_arch="pentium4 pentiumpro";;
- esac ;;
- *:68747541:*:*) # AMD
- case $ax_cv_gcc_x86_cpuid_1 in
- *5[[67]]?:*:*:*) ax_gcc_arch=k6 ;;
- *5[[8d]]?:*:*:*) ax_gcc_arch="k6-2 k6" ;;
- *5[[9]]?:*:*:*) ax_gcc_arch="k6-3 k6" ;;
- *60?:*:*:*) ax_gcc_arch=k7 ;;
- *6[[12]]?:*:*:*) ax_gcc_arch="athlon k7" ;;
- *6[[34]]?:*:*:*) ax_gcc_arch="athlon-tbird k7" ;;
- *67?:*:*:*) ax_gcc_arch="athlon-4 athlon k7" ;;
- *6[[68a]]?:*:*:*)
- AX_GCC_X86_CPUID(0x80000006) # L2 cache size
- case $ax_cv_gcc_x86_cpuid_0x80000006 in
- *:*:*[[1-9a-f]]??????:*) # (L2 = ecx >> 16) >= 256
- ax_gcc_arch="athlon-xp athlon-4 athlon k7" ;;
- *) ax_gcc_arch="athlon-4 athlon k7" ;;
- esac ;;
- *f[[4cef8b]]?:*:*:*) ax_gcc_arch="athlon64 k8" ;;
- *f5?:*:*:*) ax_gcc_arch="opteron k8" ;;
- *f7?:*:*:*) ax_gcc_arch="athlon-fx opteron k8" ;;
- *f??:*:*:*) ax_gcc_arch="k8" ;;
- esac ;;
- *:746e6543:*:*) # IDT
- case $ax_cv_gcc_x86_cpuid_1 in
- *54?:*:*:*) ax_gcc_arch=winchip-c6 ;;
- *58?:*:*:*) ax_gcc_arch=winchip2 ;;
- *6[[78]]?:*:*:*) ax_gcc_arch=c3 ;;
- *69?:*:*:*) ax_gcc_arch="c3-2 c3" ;;
- esac ;;
- esac
- if test x"$ax_gcc_arch" = x; then # fallback
- case $host_cpu in
- i586*) ax_gcc_arch=pentium ;;
- i686*) ax_gcc_arch=pentiumpro ;;
- esac
- fi
- ;;
-
- sparc*)
- AC_PATH_PROG([PRTDIAG], [prtdiag], [prtdiag], [$PATH:/usr/platform/`uname -i`/sbin/:/usr/platform/`uname -m`/sbin/])
- cputype=`(((grep cpu /proc/cpuinfo | cut -d: -f2) ; ($PRTDIAG -v |grep -i sparc) ; grep -i cpu /var/run/dmesg.boot ) | head -n 1) 2> /dev/null`
- cputype=`echo "$cputype" | tr -d ' -' |tr $as_cr_LETTERS $as_cr_letters`
- case $cputype in
- *ultrasparciv*) ax_gcc_arch="ultrasparc4 ultrasparc3 ultrasparc v9" ;;
- *ultrasparciii*) ax_gcc_arch="ultrasparc3 ultrasparc v9" ;;
- *ultrasparc*) ax_gcc_arch="ultrasparc v9" ;;
- *supersparc*|*tms390z5[[05]]*) ax_gcc_arch="supersparc v8" ;;
- *hypersparc*|*rt62[[056]]*) ax_gcc_arch="hypersparc v8" ;;
- *cypress*) ax_gcc_arch=cypress ;;
- esac ;;
-
- alphaev5) ax_gcc_arch=ev5 ;;
- alphaev56) ax_gcc_arch=ev56 ;;
- alphapca56) ax_gcc_arch="pca56 ev56" ;;
- alphapca57) ax_gcc_arch="pca57 pca56 ev56" ;;
- alphaev6) ax_gcc_arch=ev6 ;;
- alphaev67) ax_gcc_arch=ev67 ;;
- alphaev68) ax_gcc_arch="ev68 ev67" ;;
- alphaev69) ax_gcc_arch="ev69 ev68 ev67" ;;
- alphaev7) ax_gcc_arch="ev7 ev69 ev68 ev67" ;;
- alphaev79) ax_gcc_arch="ev79 ev7 ev69 ev68 ev67" ;;
-
- powerpc*)
- cputype=`((grep cpu /proc/cpuinfo | head -n 1 | cut -d: -f2 | cut -d, -f1 | sed 's/ //g') ; /usr/bin/machine ; /bin/machine; grep CPU /var/run/dmesg.boot | head -n 1 | cut -d" " -f2) 2> /dev/null`
- cputype=`echo $cputype | sed -e 's/ppc//g;s/ *//g'`
- case $cputype in
- *750*) ax_gcc_arch="750 G3" ;;
- *740[[0-9]]*) ax_gcc_arch="$cputype 7400 G4" ;;
- *74[[4-5]][[0-9]]*) ax_gcc_arch="$cputype 7450 G4" ;;
- *74[[0-9]][[0-9]]*) ax_gcc_arch="$cputype G4" ;;
- *970*) ax_gcc_arch="970 G5 power4";;
- *POWER4*|*power4*|*gq*) ax_gcc_arch="power4 970";;
- *POWER5*|*power5*|*gr*|*gs*) ax_gcc_arch="power5 power4 970";;
- 603ev|8240) ax_gcc_arch="$cputype 603e 603";;
- *) ax_gcc_arch=$cputype ;;
- esac
- ax_gcc_arch="$ax_gcc_arch powerpc"
- ;;
-esac
-fi # not cross-compiling
-fi # guess arch
-
-if test "x$ax_gcc_arch" != x -a "x$ax_gcc_arch" != xno; then
-for arch in $ax_gcc_arch; do
- if test "x[]m4_default([$1],yes)" = xyes; then # if we require portable code
- flags="-mtune=$arch"
- # -mcpu=$arch and m$arch generate nonportable code on every arch except
- # x86. And some other arches (e.g. Alpha) don't accept -mtune. Grrr.
- case $host_cpu in i*86|x86_64*) flags="$flags -mcpu=$arch -m$arch";; esac
- else
- flags="-march=$arch -mcpu=$arch -m$arch"
- fi
- for flag in $flags; do
- AX_CHECK_COMPILER_FLAGS($flag, [ax_cv_gcc_archflag=$flag; break])
- done
- test "x$ax_cv_gcc_archflag" = xunknown || break
-done
-fi
-
-fi # $GCC=yes
-])
-AC_MSG_CHECKING([for gcc architecture flag])
-AC_MSG_RESULT($ax_cv_gcc_archflag)
-if test "x$ax_cv_gcc_archflag" = xunknown; then
- m4_default([$3],:)
-else
- m4_default([$2], [CFLAGS="$CFLAGS $ax_cv_gcc_archflag"])
-fi
-])
diff --git a/m4/ax_gcc_version.m4 b/m4/ax_gcc_version.m4
deleted file mode 100644
index 0d924741f..000000000
--- a/m4/ax_gcc_version.m4
+++ /dev/null
@@ -1,65 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_gcc_version.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_GCC_VERSION
-#
-# DESCRIPTION
-#
-# This macro retrieves the gcc version and returns it in the GCC_VERSION
-# variable if available, an empty string otherwise.
-#
-# LICENSE
-#
-# Copyright (c) 2009 Francesco Salvestrini <salvestrini@users.sourceforge.net>
-#
-# This program is free software; you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation; either version 2 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 8
-
-AC_DEFUN([AX_GCC_VERSION], [
- GCC_VERSION=""
- AX_GCC_OPTION([-dumpversion],[],[],[
- ax_gcc_version_option=yes
- ],[
- ax_gcc_version_option=no
- ])
- AS_IF([test "x$GCC" = "xyes"],[
- AS_IF([test "x$ax_gcc_version_option" != "xno"],[
- AC_CACHE_CHECK([gcc version],[ax_cv_gcc_version],[
- ax_cv_gcc_version="`$CC -dumpversion`"
- AS_IF([test "x$ax_cv_gcc_version" = "x"],[
- ax_cv_gcc_version=""
- ])
- ])
- GCC_VERSION=$ax_cv_gcc_version
- ])
- ])
- AC_SUBST([GCC_VERSION])
-])
diff --git a/m4/ax_gcc_x86_cpuid.m4 b/m4/ax_gcc_x86_cpuid.m4
deleted file mode 100644
index 7d46fee02..000000000
--- a/m4/ax_gcc_x86_cpuid.m4
+++ /dev/null
@@ -1,79 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_gcc_x86_cpuid.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_GCC_X86_CPUID(OP)
-#
-# DESCRIPTION
-#
-# On Pentium and later x86 processors, with gcc or a compiler that has a
-# compatible syntax for inline assembly instructions, run a small program
-# that executes the cpuid instruction with input OP. This can be used to
-# detect the CPU type.
-#
-# On output, the values of the eax, ebx, ecx, and edx registers are stored
-# as hexadecimal strings as "eax:ebx:ecx:edx" in the cache variable
-# ax_cv_gcc_x86_cpuid_OP.
-#
-# If the cpuid instruction fails (because you are running a
-# cross-compiler, or because you are not using gcc, or because you are on
-# a processor that doesn't have this instruction), ax_cv_gcc_x86_cpuid_OP
-# is set to the string "unknown".
-#
-# This macro mainly exists to be used in AX_GCC_ARCHFLAG.
-#
-# LICENSE
-#
-# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-# Copyright (c) 2008 Matteo Frigo
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 7
-
-AC_DEFUN([AX_GCC_X86_CPUID],
-[AC_REQUIRE([AC_PROG_CC])
-AC_LANG_PUSH([C])
-AC_CACHE_CHECK(for x86 cpuid $1 output, ax_cv_gcc_x86_cpuid_$1,
- [AC_RUN_IFELSE([AC_LANG_PROGRAM([#include <stdio.h>], [
- int op = $1, eax, ebx, ecx, edx;
- FILE *f;
- __asm__("cpuid"
- : "=a" (eax), "=b" (ebx), "=c" (ecx), "=d" (edx)
- : "a" (op));
- f = fopen("conftest_cpuid", "w"); if (!f) return 1;
- fprintf(f, "%x:%x:%x:%x\n", eax, ebx, ecx, edx);
- fclose(f);
- return 0;
-])],
- [ax_cv_gcc_x86_cpuid_$1=`cat conftest_cpuid`; rm -f conftest_cpuid],
- [ax_cv_gcc_x86_cpuid_$1=unknown; rm -f conftest_cpuid],
- [ax_cv_gcc_x86_cpuid_$1=unknown])])
-AC_LANG_POP([C])
-])
diff --git a/m4/ax_lapack.m4 b/m4/ax_lapack.m4
deleted file mode 100644
index 74bd51255..000000000
--- a/m4/ax_lapack.m4
+++ /dev/null
@@ -1,132 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_lapack.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_LAPACK([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-#
-# DESCRIPTION
-#
-# This macro looks for a library that implements the LAPACK linear-algebra
-# interface (see http://www.netlib.org/lapack/). On success, it sets the
-# LAPACK_LIBS output variable to hold the requisite library linkages.
-#
-# To link with LAPACK, you should link with:
-#
-# $LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS
-#
-# in that order. BLAS_LIBS is the output variable of the AX_BLAS macro,
-# called automatically. FLIBS is the output variable of the
-# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
-# sometimes necessary in order to link with F77 libraries. Users will also
-# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
-# reason.
-#
-# The user may also use --with-lapack=<lib> in order to use some specific
-# LAPACK library <lib>. In order to link successfully, however, be aware
-# that you will probably need to use the same Fortran compiler (which can
-# be set via the F77 env. var.) as was used to compile the LAPACK and BLAS
-# libraries.
-#
-# ACTION-IF-FOUND is a list of shell commands to run if a LAPACK library
-# is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it
-# is not found. If ACTION-IF-FOUND is not specified, the default action
-# will define HAVE_LAPACK.
-#
-# LICENSE
-#
-# Copyright (c) 2009 Steven G. Johnson <stevenj@alum.mit.edu>
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 7
-
-AU_ALIAS([ACX_LAPACK], [AX_LAPACK])
-AC_DEFUN([AX_LAPACK], [
-AC_REQUIRE([AX_BLAS])
-ax_lapack_ok=no
-
-AC_ARG_WITH(lapack,
- [AS_HELP_STRING([--with-lapack=<lib>], [use LAPACK library <lib>])])
-case $with_lapack in
- yes | "") ;;
- no) ax_lapack_ok=disable ;;
- -* | */* | *.a | *.so | *.so.* | *.o) LAPACK_LIBS="$with_lapack" ;;
- *) LAPACK_LIBS="-l$with_lapack" ;;
-esac
-
-# Get fortran linker name of LAPACK function to check for.
-AC_F77_FUNC(cheev)
-
-# We cannot use LAPACK if BLAS is not found
-if test "x$ax_blas_ok" != xyes; then
- ax_lapack_ok=noblas
- LAPACK_LIBS=""
-fi
-
-# First, check LAPACK_LIBS environment variable
-if test "x$LAPACK_LIBS" != x; then
- save_LIBS="$LIBS"; LIBS="$LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS"
- AC_MSG_CHECKING([for $cheev in $LAPACK_LIBS])
- AC_TRY_LINK_FUNC($cheev, [ax_lapack_ok=yes], [LAPACK_LIBS=""])
- AC_MSG_RESULT($ax_lapack_ok)
- LIBS="$save_LIBS"
- if test $ax_lapack_ok = no; then
- LAPACK_LIBS=""
- fi
-fi
-
-# LAPACK linked to by default? (is sometimes included in BLAS lib)
-if test $ax_lapack_ok = no; then
- save_LIBS="$LIBS"; LIBS="$LIBS $BLAS_LIBS $FLIBS"
- AC_CHECK_FUNC($cheev, [ax_lapack_ok=yes])
- LIBS="$save_LIBS"
-fi
-
-# Generic LAPACK library?
-for lapack in lapack lapack_rs6k; do
- if test $ax_lapack_ok = no; then
- save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
- AC_CHECK_LIB($lapack, $cheev,
- [ax_lapack_ok=yes; LAPACK_LIBS="-l$lapack"], [], [$FLIBS])
- LIBS="$save_LIBS"
- fi
-done
-
-AC_SUBST(LAPACK_LIBS)
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x"$ax_lapack_ok" = xyes; then
- ifelse([$1],,AC_DEFINE(HAVE_LAPACK,1,[Define if you have LAPACK library.]),[$1])
- :
-else
- ax_lapack_ok=no
- $2
-fi
-])dnl AX_LAPACK
-
diff --git a/m4/ax_lib_hdf5.m4 b/m4/ax_lib_hdf5.m4
deleted file mode 100644
index e793fe0fe..000000000
--- a/m4/ax_lib_hdf5.m4
+++ /dev/null
@@ -1,312 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_lib_hdf5.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_LIB_HDF5([serial/parallel])
-#
-# DESCRIPTION
-#
-# This macro provides tests of the availability of HDF5 library.
-#
-# The optional macro argument should be either 'serial' or 'parallel'. The
-# former only looks for serial HDF5 installations via h5cc. The latter
-# only looks for parallel HDF5 installations via h5pcc. If the optional
-# argument is omitted, serial installations will be preferred over
-# parallel ones.
-#
-# The macro adds a --with-hdf5 option accepting one of three values:
-#
-# no - do not check for the HDF5 library.
-# yes - do check for HDF5 library in standard locations.
-# path - complete path to the HDF5 helper script h5cc or h5pcc.
-#
-# If HDF5 is successfully found, this macro calls
-#
-# AC_SUBST(HDF5_VERSION)
-# AC_SUBST(HDF5_CC)
-# AC_SUBST(HDF5_CFLAGS)
-# AC_SUBST(HDF5_CPPFLAGS)
-# AC_SUBST(HDF5_LDFLAGS)
-# AC_SUBST(HDF5_LIBS)
-# AC_SUBST(HDF5_FC)
-# AC_SUBST(HDF5_FFLAGS)
-# AC_SUBST(HDF5_FLIBS)
-# AC_DEFINE(HAVE_HDF5)
-#
-# and sets with_hdf5="yes". Additionally, the macro sets
-# with_hdf5_fortran="yes" if a matching Fortran wrapper script is found.
-# Note that Autconf's Fortran support is not used to perform this check.
-# H5CC and H5FC will contain the appropriate serial or parallel HDF5
-# wrapper script locations.
-#
-# If HDF5 is disabled or not found, this macros sets with_hdf5="no" and
-# with_hdf5_fortran="no".
-#
-# Your configuration script can test $with_hdf to take any further
-# actions. HDF5_{C,CPP,LD}FLAGS may be used when building with C or C++.
-# HDF5_F{FLAGS,LIBS} should be used when building Fortran applications.
-#
-# To use the macro, one would code one of the following in "configure.ac"
-# before AC_OUTPUT:
-#
-# 1) dnl Check for HDF5 support
-# AX_LIB_HDF5()
-#
-# 2) dnl Check for serial HDF5 support
-# AX_LIB_HDF5([serial])
-#
-# 3) dnl Check for parallel HDF5 support
-# AX_LIB_HDF5([parallel])
-#
-# One could test $with_hdf5 for the outcome or display it as follows
-#
-# echo "HDF5 support: $with_hdf5"
-#
-# You could also for example, override the default CC in "configure.ac" to
-# enforce compilation with the compiler that HDF5 uses:
-#
-# AX_LIB_HDF5([parallel])
-# if test "$with_hdf5" = "yes"; then
-# CC="$HDF5_CC"
-# else
-# AC_MSG_ERROR([Unable to find HDF5, we need parallel HDF5.])
-# fi
-#
-# LICENSE
-#
-# Copyright (c) 2009 Timothy Brown <tbrown@freeshell.org>
-# Copyright (c) 2010 Rhys Ulerich <rhys.ulerich@gmail.com>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 12
-
-AC_DEFUN([AX_LIB_HDF5], [
-
-AC_REQUIRE([AC_PROG_SED])
-AC_REQUIRE([AC_PROG_AWK])
-AC_REQUIRE([AC_PROG_GREP])
-
-dnl Check first argument is one of the recognized values.
-dnl Fail eagerly if is incorrect as this simplifies case statements below.
-if test "m4_normalize(m4_default([$1],[]))" = "" ; then
- : # Recognized value
-elif test "m4_normalize(m4_default([$1],[]))" = "serial" ; then
- : # Recognized value
-elif test "m4_normalize(m4_default([$1],[]))" = "parallel"; then
- : # Recognized value
-else
- AC_MSG_ERROR([
-Unrecognized value for AX[]_LIB_HDF5 within configure.ac.
-If supplied, argument 1 must be either 'serial' or 'parallel'.
-])
-fi
-
-dnl Add a default --with-hdf5 configuration option.
-AC_ARG_WITH([hdf5],
- AS_HELP_STRING(
- [--with-hdf5=[yes/no/PATH]],
- m4_case(m4_normalize([$1]),
- [serial], [location of h5cc for serial HDF5 configuration],
- [parallel], [location of h5pcc for parallel HDF5 configuration],
- [location of h5cc or h5pcc for HDF5 configuration])
- ),
- [if test "$withval" = "no"; then
- with_hdf5="no"
- elif test "$withval" = "yes"; then
- with_hdf5="yes"
- else
- with_hdf5="yes"
- H5CC="$withval"
- fi],
- [with_hdf5="yes"]
-)
-
-dnl Set defaults to blank
-HDF5_CC=""
-HDF5_VERSION=""
-HDF5_CFLAGS=""
-HDF5_CPPFLAGS=""
-HDF5_LDFLAGS=""
-HDF5_LIBS=""
-HDF5_FC=""
-HDF5_FFLAGS=""
-HDF5_FLIBS=""
-
-dnl Try and find hdf5 compiler tools and options.
-if test "$with_hdf5" = "yes"; then
- if test -z "$H5CC"; then
- dnl Check to see if H5CC is in the path.
- AC_PATH_PROGS(
- [H5CC],
- m4_case(m4_normalize([$1]),
- [serial], [h5cc],
- [parallel], [h5pcc],
- [h5cc h5pcc]),
- [])
- else
- AC_MSG_CHECKING([Using provided HDF5 C wrapper])
- AC_MSG_RESULT([$H5CC])
- fi
- AC_MSG_CHECKING([for HDF5 libraries])
- if test ! -f "$H5CC" || test ! -x "$H5CC"; then
- AC_MSG_RESULT([no])
- AC_MSG_WARN(m4_case(m4_normalize([$1]),
- [serial], [
-Unable to locate serial HDF5 compilation helper script 'h5cc'.
-Please specify --with-hdf5=<LOCATION> as the full path to h5cc.
-HDF5 support is being disabled (equivalent to --with-hdf5=no).
-], [parallel],[
-Unable to locate parallel HDF5 compilation helper script 'h5pcc'.
-Please specify --with-hdf5=<LOCATION> as the full path to h5pcc.
-HDF5 support is being disabled (equivalent to --with-hdf5=no).
-], [
-Unable to locate HDF5 compilation helper scripts 'h5cc' or 'h5pcc'.
-Please specify --with-hdf5=<LOCATION> as the full path to h5cc or h5pcc.
-HDF5 support is being disabled (equivalent to --with-hdf5=no).
-]))
- with_hdf5="no"
- with_hdf5_fortran="no"
- else
- dnl Get the h5cc output
- HDF5_SHOW=$(eval $H5CC -show)
-
- dnl Get the actual compiler used
- HDF5_CC=$(eval $H5CC -show | $AWK '{print $[]1}')
- if test "$HDF5_CC" = "ccache"; then
- HDF5_CC=$(eval $H5CC -show | $AWK '{print $[]2}')
- fi
-
- dnl h5cc provides both AM_ and non-AM_ options
- dnl depending on how it was compiled either one of
- dnl these are empty. Lets roll them both into one.
-
- dnl Look for "HDF5 Version: X.Y.Z"
- HDF5_VERSION=$(eval $H5CC -showconfig | $GREP 'HDF5 Version:' \
- | $AWK '{print $[]3}')
-
- dnl A ideal situation would be where everything we needed was
- dnl in the AM_* variables. However most systems are not like this
- dnl and seem to have the values in the non-AM variables.
- dnl
- dnl We try the following to find the flags:
- dnl (1) Look for "NAME:" tags
- dnl (2) Look for "H5_NAME:" tags
- dnl (3) Look for "AM_NAME:" tags
- dnl
- HDF5_tmp_flags=$(eval $H5CC -showconfig \
- | $GREP 'FLAGS\|Extra libraries:' \
- | $AWK -F: '{printf("%s "), $[]2}' )
-
- dnl Find the installation directory and append include/
- HDF5_tmp_inst=$(eval $H5CC -showconfig \
- | $GREP 'Installation point:' \
- | $AWK '{print $[]NF}' )
-
- dnl Add this to the CPPFLAGS
- HDF5_CPPFLAGS="-I${HDF5_tmp_inst}/include"
-
- dnl Now sort the flags out based upon their prefixes
- for arg in $HDF5_SHOW $HDF5_tmp_flags ; do
- case "$arg" in
- -I*) echo $HDF5_CPPFLAGS | $GREP -e "$arg" 2>&1 >/dev/null \
- || HDF5_CPPFLAGS="$arg $HDF5_CPPFLAGS"
- ;;
- -L*) echo $HDF5_LDFLAGS | $GREP -e "$arg" 2>&1 >/dev/null \
- || HDF5_LDFLAGS="$arg $HDF5_LDFLAGS"
- ;;
- -l*) echo $HDF5_LIBS | $GREP -e "$arg" 2>&1 >/dev/null \
- || HDF5_LIBS="$arg $HDF5_LIBS"
- ;;
- esac
- done
-
- HDF5_LIBS="$HDF5_LIBS -lhdf5"
- AC_MSG_RESULT([yes (version $[HDF5_VERSION])])
-
- dnl See if we can compile
- AC_LANG_PUSH([C])
- ax_lib_hdf5_save_CC=$CC
- ax_lib_hdf5_save_CPPFLAGS=$CPPFLAGS
- ax_lib_hdf5_save_LIBS=$LIBS
- ax_lib_hdf5_save_LDFLAGS=$LDFLAGS
- CC=$HDF5_CC
- CPPFLAGS=$HDF5_CPPFLAGS
- LIBS=$HDF5_LIBS
- LDFLAGS=$HDF5_LDFLAGS
- AC_CHECK_HEADER([hdf5.h], [ac_cv_hadf5_h=yes], [ac_cv_hadf5_h=no])
- AC_CHECK_LIB([hdf5], [H5Fcreate], [ac_cv_libhdf5=yes],
- [ac_cv_libhdf5=no])
- if test "$ac_cv_hadf5_h" = "no" && test "$ac_cv_libhdf5" = "no" ; then
- AC_MSG_WARN([Unable to compile HDF5 test program])
- fi
- dnl Look for HDF5's high level library
- AC_HAVE_LIBRARY([hdf5_hl], [HDF5_LIBS="$HDF5_LIBS -lhdf5_hl"], [], [])
-
- CC=$ax_lib_hdf5_save_CC
- CPPFLAGS=$ax_lib_hdf5_save_CPPFLAGS
- LIBS=$ax_lib_hdf5_save_LIBS
- LDFLAGS=$ax_lib_hdf5_save_LDFLAGS
- AC_LANG_POP([C])
-
- AC_MSG_CHECKING([for matching HDF5 Fortran wrapper])
- dnl Presume HDF5 Fortran wrapper is just a name variant from H5CC
- H5FC=$(eval echo -n $H5CC | $SED -n 's/cc$/fc/p')
- if test -x "$H5FC"; then
- AC_MSG_RESULT([$H5FC])
- with_hdf5_fortran="yes"
- AC_SUBST([H5FC])
-
- dnl Again, pry any remaining -Idir/-Ldir from compiler wrapper
- for arg in `$H5FC -show`
- do
- case "$arg" in #(
- -I*) echo $HDF5_FFLAGS | $GREP -e "$arg" >/dev/null \
- || HDF5_FFLAGS="$arg $HDF5_FFLAGS"
- ;;#(
- -L*) echo $HDF5_FFLAGS | $GREP -e "$arg" >/dev/null \
- || HDF5_FFLAGS="$arg $HDF5_FFLAGS"
- dnl HDF5 installs .mod files in with libraries,
- dnl but some compilers need to find them with -I
- echo $HDF5_FFLAGS | $GREP -e "-I${arg#-L}" >/dev/null \
- || HDF5_FFLAGS="-I${arg#-L} $HDF5_FFLAGS"
- ;;
- esac
- done
-
- dnl Make Fortran link line by inserting Fortran libraries
- for arg in $HDF5_LIBS
- do
- case "$arg" in #(
- -lhdf5_hl) HDF5_FLIBS="$HDF5_FLIBS -lhdf5hl_fortran $arg"
- ;; #(
- -lhdf5) HDF5_FLIBS="$HDF5_FLIBS -lhdf5_fortran $arg"
- ;; #(
- *) HDF5_FLIBS="$HDF5_FLIBS $arg"
- ;;
- esac
- done
- else
- AC_MSG_RESULT([no])
- with_hdf5_fortran="no"
- fi
-
- AC_SUBST([HDF5_VERSION])
- AC_SUBST([HDF5_CC])
- AC_SUBST([HDF5_CFLAGS])
- AC_SUBST([HDF5_CPPFLAGS])
- AC_SUBST([HDF5_LDFLAGS])
- AC_SUBST([HDF5_LIBS])
- AC_SUBST([HDF5_FC])
- AC_SUBST([HDF5_FFLAGS])
- AC_SUBST([HDF5_FLIBS])
- AC_DEFINE([HAVE_HDF5], [1], [Defined if you have HDF5 support])
- fi
-fi
-])
-
diff --git a/m4/ax_lib_mysql.m4 b/m4/ax_lib_mysql.m4
deleted file mode 100644
index b4d19120e..000000000
--- a/m4/ax_lib_mysql.m4
+++ /dev/null
@@ -1,145 +0,0 @@
-# ===========================================================================
-# http://www.nongnu.org/autoconf-archive/ax_lib_mysql.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_LIB_MYSQL([MINIMUM-VERSION])
-#
-# DESCRIPTION
-#
-# This macro provides tests of availability of MySQL client library of
-# particular version or newer.
-#
-# AX_LIB_MYSQL macro takes only one argument which is optional. If there
-# is no required version passed, then macro does not run version test.
-#
-# The --with-mysql option takes one of three possible values:
-#
-# no - do not check for MySQL client library
-#
-# yes - do check for MySQL library in standard locations (mysql_config
-# should be in the PATH)
-#
-# path - complete path to mysql_config utility, use this option if
-# mysql_config can't be found in the PATH
-#
-# This macro calls:
-#
-# AC_SUBST(MYSQL_CFLAGS)
-# AC_SUBST(MYSQL_LDFLAGS)
-# AC_SUBST(MYSQL_VERSION)
-#
-# And sets:
-#
-# HAVE_MYSQL
-#
-# LICENSE
-#
-# Copyright (c) 2008 Mateusz Loskot <mateusz@loskot.net>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved.
-
-AC_DEFUN([AX_LIB_MYSQL],
-[
- AC_ARG_WITH([mysql],
- AC_HELP_STRING([--with-mysql=@<:@ARG@:>@],
- [use MySQL client library @<:@default=yes@:>@, optionally specify path to mysql_config]
- ),
- [
- if test "$withval" = "no"; then
- want_mysql="no"
- elif test "$withval" = "yes"; then
- want_mysql="yes"
- else
- want_mysql="yes"
- MYSQL_CONFIG="$withval"
- fi
- ],
- [want_mysql="yes"]
- )
-
- MYSQL_CFLAGS=""
- MYSQL_LDFLAGS=""
- MYSQL_VERSION=""
-
- dnl
- dnl Check MySQL libraries (libpq)
- dnl
-
- if test "$want_mysql" = "yes"; then
-
- if test -z "$MYSQL_CONFIG" -o test; then
- AC_PATH_PROG([MYSQL_CONFIG], [mysql_config], [no])
- fi
-
- if test "$MYSQL_CONFIG" != "no"; then
- AC_MSG_CHECKING([for MySQL libraries])
-
- MYSQL_CFLAGS="`$MYSQL_CONFIG --cflags`"
- MYSQL_LDFLAGS="`$MYSQL_CONFIG --libs`"
-
- MYSQL_VERSION=`$MYSQL_CONFIG --version`
-
- AC_DEFINE([HAVE_MYSQL], [1],
- [Define to 1 if MySQL libraries are available])
-
- found_mysql="yes"
- AC_MSG_RESULT([yes])
- else
- found_mysql="no"
-# AC_MSG_RESULT([no])
- fi
- fi
-
- dnl
- dnl Check if required version of MySQL is available
- dnl
-
-
- mysql_version_req=ifelse([$1], [], [], [$1])
-
- if test "$found_mysql" = "yes" -a -n "$mysql_version_req"; then
-
- AC_MSG_CHECKING([if MySQL version is >= $mysql_version_req])
-
- dnl Decompose required version string of MySQL
- dnl and calculate its number representation
- mysql_version_req_major=`expr $mysql_version_req : '\([[0-9]]*\)'`
- mysql_version_req_minor=`expr $mysql_version_req : '[[0-9]]*\.\([[0-9]]*\)'`
- mysql_version_req_micro=`expr $mysql_version_req : '[[0-9]]*\.[[0-9]]*\.\([[0-9]]*\)'`
- if test "x$mysql_version_req_micro" = "x"; then
- mysql_version_req_micro="0"
- fi
-
- mysql_version_req_number=`expr $mysql_version_req_major \* 1000000 \
- \+ $mysql_version_req_minor \* 1000 \
- \+ $mysql_version_req_micro`
-
- dnl Decompose version string of installed MySQL
- dnl and calculate its number representation
- mysql_version_major=`expr $MYSQL_VERSION : '\([[0-9]]*\)'`
- mysql_version_minor=`expr $MYSQL_VERSION : '[[0-9]]*\.\([[0-9]]*\)'`
- mysql_version_micro=`expr $MYSQL_VERSION : '[[0-9]]*\.[[0-9]]*\.\([[0-9]]*\)'`
- if test "x$mysql_version_micro" = "x"; then
- mysql_version_micro="0"
- fi
-
- mysql_version_number=`expr $mysql_version_major \* 1000000 \
- \+ $mysql_version_minor \* 1000 \
- \+ $mysql_version_micro`
-
- mysql_version_check=`expr $mysql_version_number \>\= $mysql_version_req_number`
- if test "$mysql_version_check" = "1"; then
- AC_MSG_RESULT([yes])
- else
- AC_MSG_RESULT([no])
- fi
- fi
-
- AC_SUBST([MYSQL_VERSION])
- AC_SUBST([MYSQL_CFLAGS])
- AC_SUBST([MYSQL_LDFLAGS])
-])
diff --git a/m4/ax_libhilbert.m4 b/m4/ax_libhilbert.m4
deleted file mode 100644
index fd0850a23..000000000
--- a/m4/ax_libhilbert.m4
+++ /dev/null
@@ -1,143 +0,0 @@
-# ===========================================================================
-#
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_LIB_HILBERT()
-#
-# DESCRIPTION
-#
-# This macro provides tests of the availability of libHilbert library.
-#
-#
-# The macro adds a --with-libhilbert option accepting one of three values:
-#
-# no - do not check for the libhilbert library.
-# yes - do check for libhilbert library in standard locations.
-# path - complete path to the libhilbert library.
-#
-# If libhilbert is successfully found, this macro calls
-#
-# AC_SUBST(LIBHILBERT_INCLUDE)
-# AC_SUBST(LIBHILBERT_LIB)
-# AC_DEFINE(HAVE_LIBHILBERT)
-#
-# and sets with_libhilbert="yes"
-#
-# If libhilbert is disabled or not found, this macros sets with_libhilbert="no"
-#
-# Your configuration script can test $with_libhilbert to take any further
-# actions. LIBHILBERT_{INCLUDE,LIB} may be used when building with C or C++.
-#
-# To use the macro, one would code one of the following in "configure.ac"
-# before AC_OUTPUT:
-#
-# 1) dnl Check for libhilbert support
-# AX_LIB_HILBERT()
-#
-# One could test $with_libhilbert for the outcome or display it as follows
-#
-# echo "libhilbert support: $with_libhilbert"
-#
-# You could also for example, override the default CC in "configure.ac"
-#
-# LICENSE
-#
-# Copyright (c) 2009 Timothy Brown <tbrown@freeshell.org>
-# Copyright (c) 2010 Rhys Ulerich <rhys.ulerich@gmail.com>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 12
-
-AC_DEFUN([AX_LIB_HILBERT], [
- AC_MSG_CHECKING(for libhilbert library)
- AC_REQUIRE([AC_PROG_CC])
- #
- # User hints...
- #
- AC_ARG_VAR([LIBHILBERT], [Libhilbert library location])
- AC_ARG_WITH([libhilbert],
- [AC_HELP_STRING([--with-libhilbert],
- [user defined path to LIBHILBERT library])],
- [
- if test -n "$LIBHILBERT" ; then
- AC_MSG_RESULT(yes)
- with_libhilbert=$LIBHILBERT
- elif test "$withval" != no ; then
- AC_MSG_RESULT(yes)
- with_libhilbert=$withval
- else
- AC_MSG_RESULT(no)
- fi
- ],
- [
- if test -n "$PETSC" ; then
- with_libhilbert=$PETSC
- AC_MSG_RESULT(yes)
- else
- with_libhilbert=/usr
- if test ! -f "$with_libhilbert/include/hilbertKey.h" ; then
- with_libhilbert=/usr/local
- if test ! -f "$with_libhilbert/include/hilbertKey.h" ; then
- with_libhilbert=""
- AC_MSG_RESULT(failed)
- else
- AC_MSG_RESULT(yes)
- fi
- else
- AC_MSG_RESULT(yes)
- fi
- fi
- ])
- #
- # locate LIBHILBERT library
- #
-
- if test -n "$with_libhilbert" ; then
- old_CC=$CC
- old_CFLAGS=$CFLAGS
- old_LDFLAGS=$LDFLAGS
- CFLAGS="-I$with_libhilbert/include "
- LDFLAGS="-L$with_libhilbert/lib "
- CC=$CXX
-
- AC_LANG_SAVE
- AC_LANG_C
-
- AC_CHECK_HEADER([hilbertKey.h],libhilbert_h=yes,## Copy LIB and include in the target directory
-AC_MSG_WARN([could not find header file hilbertKey.h]))
- AC_CHECK_LIB([libhilbert],[getIntCoordFromHKey],libhilbert_lib=yes,AC_MSG_WARN([could not find libhilbert]))
-
- AC_LANG_RESTORE
-
- CFLAGS=$old_CFLAGS
- LDFLAGS=$old_LDFLAGS
- CC=$old_CC
-
- AC_MSG_CHECKING(LIBHILBERT in $with_libhilbert)
- if test x"$libhilbert_lib" = x"yes" -a x"$libhilbert_h" = x"yes" ; then
- AC_SUBST(LIBHILBERT_INCLUDE, [-I$with_libhilbert/include])
- AC_SUBST(LIBHILBERT_LIB, ["-L$with_libhilbert/lib -llibhilbert"])
- AC_MSG_RESULT(ok)
- AC_DEFINE(HAVE_LIBHILBERT,1,[Define if you have LIBHILBERT library])
- else
- AC_MSG_RESULT(failed)
- fi
- fi
- #
- #
- #
- if test x = x"$LIBHILBERT_LIB" ; then
- ifelse([$2],,[],[$2])
- :
- else
- ifelse([$1],,[],[$1])
- :
- fi
- ])dnl AX_LIB_HILBERT
-
diff --git a/m4/ax_opencl.m4 b/m4/ax_opencl.m4
deleted file mode 100644
index 9ed1d963b..000000000
--- a/m4/ax_opencl.m4
+++ /dev/null
@@ -1,119 +0,0 @@
-# -*- mode: autoconf -*-
-#
-# AX_OPENCL
-#
-# Check for an OpenCL implementation. If CL is found, _OPENCL is defined and
-# the required compiler and linker flags are included in the output variables
-# "CL_CFLAGS" and "CL_LIBS", respectively. If no usable CL implementation is
-# found, "no_cl" is set to "yes".
-#
-# If the header "CL/OpenCL.h" is found, "HAVE_CL_OPENCL_H" is defined. If the
-# header "OpenCL/OpenCL.h" is found, HAVE_OPENCL_OPENCL_H is defined. These
-# preprocessor definitions may not be mutually exclusive.
-#
-# Based on AX_CHECK_GL, version: 2.4 author: Braden McDaniel
-# <braden@endoframe.com>
-#
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
-# 02110-1301, USA.
-#
-# As a special exception, the you may copy, distribute and modify the
-# configure scripts that are the output of Autoconf when processing
-# the Macro. You need not follow the terms of the GNU General Public
-# License when using or distributing such scripts.
-#
-AC_DEFUN([AX_OPENCL],
-[AC_REQUIRE([AC_CANONICAL_HOST])dnl
-AC_REQUIRE([AC_PROG_SED])dnl
-AC_REQUIRE([ACX_PTHREAD])dnl
-
-AC_ARG_ENABLE([opencl],
-[AC_HELP_STRING([--disable-opencl],
-[do not use OpenCL])],
-[disable_opencl=$enableval],
-[disable_opencl='yes'])
-
-if test "$disable_opencl" = 'yes'; then
-AC_LANG_PUSH([$1])
-AX_LANG_COMPILER_MS
-AS_IF([test X$ax_compiler_ms = Xno],
-[CL_CFLAGS="${PTHREAD_CFLAGS}"; CL_LIBS="${PTHREAD_LIBS} -lm"])
-
-ax_save_CPPFLAGS=$CPPFLAGS
-CPPFLAGS="$CL_CFLAGS $CPPFLAGS"
-AC_CHECK_HEADERS([CL/cl.h OpenCL/cl.h])
-CPPFLAGS=$ax_save_CPPFLAGS
-
-AC_CHECK_HEADERS([windows.h])
-
-m4_define([AX_OPENCL_PROGRAM],
-[AC_LANG_PROGRAM([[
-# if defined(HAVE_WINDOWS_H) && defined(_WIN32)
-# include <windows.h>
-# endif
-# ifdef HAVE_CL_CL_H
-# include <CL/cl.h>
-# elif defined(HAVE_OPENCL_CL_H)
-# include <OpenCL/cl.h>
-# else
-# error no CL.h
-# endif]],
-[[clCreateContextFromType(0,0,0,0,0)]])])
-
-AC_CACHE_CHECK([for OpenCL library], [ax_cv_check_cl_libcl],
-[ax_cv_check_cl_libcl=no
-case $host_cpu in
-x86_64) ax_check_cl_libdir=lib64 ;;
-*) ax_check_cl_libdir=lib ;;
-esac
-ax_save_CPPFLAGS=$CPPFLAGS
-CPPFLAGS="$CL_CFLAGS $CPPFLAGS"
-ax_save_LIBS=$LIBS
-LIBS=""
-ax_check_libs="-lOpenCL -lCL -lclparser"
-for ax_lib in $ax_check_libs; do
-AS_IF([test X$ax_compiler_ms = Xyes],
-[ax_try_lib=`echo $ax_lib | $SED -e 's/^-l//' -e 's/$/.lib/'`],
-[ax_try_lib=$ax_lib])
-LIBS="$ax_try_lib $CL_LIBS $ax_save_LIBS"
-AC_LINK_IFELSE([AX_OPENCL_PROGRAM],
-[ax_cv_check_cl_libcl=$ax_try_lib; break],
-[ax_check_cl_nvidia_flags="-L/usr/$ax_check_cl_libdir/nvidia" LIBS="$ax_try_lib $ax_check_cl_nvidia_flags $CL_LIBS $ax_save_LIBS"
-AC_LINK_IFELSE([AX_OPENCL_PROGRAM],
-[ax_cv_check_cl_libcl="$ax_try_lib $ax_check_cl_nvidia_flags"; break],
-[ax_check_cl_dylib_flag='-framework OpenCL -L/System/Library/Frameworks/OpenCL.framework/Versions/A/Libraries' LIBS="$ax_try_lib $ax_check_cl_dylib_flag $CL_LIBS $ax_save_LIBS"
-AC_LINK_IFELSE([AX_OPENCL_PROGRAM],
-[ax_cv_check_cl_libcl="$ax_try_lib $ax_check_cl_dylib_flag"; break])])])
-done
-
-AS_IF([test "X$ax_cv_check_cl_libcl" = Xno -a X$no_x = Xyes],
-[LIBS='-framework OpenCL'
-AC_LINK_IFELSE([AX_OPENCL_PROGRAM],
-[ax_cv_check_cl_libcl=$LIBS])])
-
-LIBS=$ax_save_LIBS
-CPPFLAGS=$ax_save_CPPFLAGS])
-
-AS_IF([test "X$ax_cv_check_cl_libcl" = Xno],
-[no_cl=yes; CL_CFLAGS=""; CL_LIBS=""],
-[CL_LIBS="$ax_cv_check_cl_libcl $CL_LIBS"; AC_DEFINE([_OPENCL], [1],
-[Define this for the OpenCL Accelerator])])
-AC_LANG_POP([$1])
-fi
-
-AC_SUBST([CL_CFLAGS])
-AC_SUBST([CL_LIBS])
-])dnl
-
diff --git a/m4/ax_openmp.m4 b/m4/ax_openmp.m4
deleted file mode 100644
index 7ea794be0..000000000
--- a/m4/ax_openmp.m4
+++ /dev/null
@@ -1,99 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_openmp.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_OPENMP([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-#
-# DESCRIPTION
-#
-# This macro tries to find out how to compile programs that use OpenMP a
-# standard API and set of compiler directives for parallel programming
-# (see http://www-unix.mcs/)
-#
-# On success, it sets the OPENMP_CFLAGS/OPENMP_CXXFLAGS/OPENMP_F77FLAGS
-# output variable to the flag (e.g. -omp) used both to compile *and* link
-# OpenMP programs in the current language.
-#
-# NOTE: You are assumed to not only compile your program with these flags,
-# but also link it with them as well.
-#
-# If you want to compile everything with OpenMP, you should set:
-#
-# CFLAGS="$CFLAGS $OPENMP_CFLAGS"
-# #OR# CXXFLAGS="$CXXFLAGS $OPENMP_CXXFLAGS"
-# #OR# FFLAGS="$FFLAGS $OPENMP_FFLAGS"
-#
-# (depending on the selected language).
-#
-# The user can override the default choice by setting the corresponding
-# environment variable (e.g. OPENMP_CFLAGS).
-#
-# ACTION-IF-FOUND is a list of shell commands to run if an OpenMP flag is
-# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
-# not found. If ACTION-IF-FOUND is not specified, the default action will
-# define HAVE_OPENMP.
-#
-# LICENSE
-#
-# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 8
-
-AC_DEFUN([AX_OPENMP], [
-AC_PREREQ(2.59) dnl for _AC_LANG_PREFIX
-
-AC_CACHE_CHECK([for OpenMP flag of _AC_LANG compiler], ax_cv_[]_AC_LANG_ABBREV[]_openmp, [save[]_AC_LANG_PREFIX[]FLAGS=$[]_AC_LANG_PREFIX[]FLAGS
-ax_cv_[]_AC_LANG_ABBREV[]_openmp=unknown
-# Flags to try: -fopenmp (gcc), -openmp (icc), -mp (SGI & PGI),
-# -xopenmp (Sun), -omp (Tru64), -qsmp=omp (AIX), none
-ax_openmp_flags="-fopenmp -openmp -mp -xopenmp -omp -qsmp=omp none"
-if test "x$OPENMP_[]_AC_LANG_PREFIX[]FLAGS" != x; then
- ax_openmp_flags="$OPENMP_[]_AC_LANG_PREFIX[]FLAGS $ax_openmp_flags"
-fi
-for ax_openmp_flag in $ax_openmp_flags; do
- case $ax_openmp_flag in
- none) []_AC_LANG_PREFIX[]FLAGS=$save[]_AC_LANG_PREFIX[] ;;
- *) []_AC_LANG_PREFIX[]FLAGS="$save[]_AC_LANG_PREFIX[]FLAGS $ax_openmp_flag" ;;
- esac
- AC_TRY_LINK_FUNC(omp_set_num_threads,
- [ax_cv_[]_AC_LANG_ABBREV[]_openmp=$ax_openmp_flag; break])
-done
-[]_AC_LANG_PREFIX[]FLAGS=$save[]_AC_LANG_PREFIX[]FLAGS
-])
-if test "x$ax_cv_[]_AC_LANG_ABBREV[]_openmp" = "xunknown"; then
- m4_default([$2],:)
-else
- if test "x$ax_cv_[]_AC_LANG_ABBREV[]_openmp" != "xnone"; then
- OPENMP_[]_AC_LANG_PREFIX[]FLAGS=$ax_cv_[]_AC_LANG_ABBREV[]_openmp
- fi
- m4_default([$1], [AC_DEFINE(HAVE_OPENMP,1,[Define if OpenMP is enabled])])
-fi
-])dnl AX_OPENMP
diff --git a/m4/ax_petsc_lib.m4 b/m4/ax_petsc_lib.m4
deleted file mode 100755
index ba7fff894..000000000
--- a/m4/ax_petsc_lib.m4
+++ /dev/null
@@ -1,144 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_lib_petsc.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_LIB_PETSC()
-#
-# DESCRIPTION
-#
-# This macro provides tests of the availability of PETSC library.
-#
-#
-# The macro adds a --with-petsc option accepting one of three values:
-#
-# no - do not check for the PETSC library.
-# yes - do check for PETSC library in standard locations.
-# path - complete path to the PETSC library.
-#
-# If PETSC is successfully found, this macro calls
-#
-# AC_SUBST(PETSC_INCLUDE)
-# AC_SUBST(PETSC_LIB)
-# AC_DEFINE(HAVE_PETSC)
-#
-# and sets with_petsc="yes"
-#
-# If PETSC is disabled or not found, this macros sets with_petsc="no"
-#
-# Your configuration script can test $with_petsc to take any further
-# actions. PETSC_{INCLUDE,LIB} may be used when building with C or C++.
-#
-# To use the macro, one would code one of the following in "configure.ac"
-# before AC_OUTPUT:
-#
-# 1) dnl Check for PETSC support
-# AX_LIB_PETSC()
-#
-# One could test $with_petsc for the outcome or display it as follows
-#
-# echo "PETSC support: $with_petsc"
-#
-# You could also for example, override the default CC in "configure.ac"
-#
-# LICENSE
-#
-# Copyright (c) 2009 Timothy Brown <tbrown@freeshell.org>
-# Copyright (c) 2010 Rhys Ulerich <rhys.ulerich@gmail.com>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice
-# and this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-#serial 12
-
-AC_DEFUN([AX_LIB_PETSC], [
- AC_MSG_CHECKING(for PETSC library)
- AC_REQUIRE([AC_PROG_CC])
- #
- # User hints...
- #
- AC_ARG_VAR([PETSC], [PETSC library location])
- AC_ARG_WITH([petsc],
- [AC_HELP_STRING([--with-petsc],
- [user defined path to PETSC library])],
- [
- if test -n "$PETSC" ; then
- AC_MSG_RESULT(yes)
- with_petsc=$PETSC
- elif test "$withval" != no ; then
- AC_MSG_RESULT(yes)
- with_petsc=$withval
- else
- AC_MSG_RESULT(no)
- fi
- ],
- [
- if test -n "$PETSC" ; then
- with_petsc=$PETSC
- AC_MSG_RESULT(yes)
- else
- with_petsc=/usr
- if test ! -f "$with_petsc/include/petsc.h" ; then
- with_petsc=/usr/local
- if test ! -f "$with_petsc/include/petsc.h" ; then
- with_petsc=""
- AC_MSG_RESULT(failed)
- else
- AC_MSG_RESULT(yes)
- fi
- else
- AC_MSG_RESULT(yes)
- fi
- fi
- ])
- #
- # locate PETSC library
- #
-
- if test -n "$with_petsc" ; then
- old_CC=$CC
- old_CFLAGS=$CFLAGS
- old_LDFLAGS=$LDFLAGS
- AX_OPENMP([CFLAGS="$OPENMP_CFLAGS"
- LDFLAGS="$OPENMP_LDFLAGS"],[])
- CFLAGS="$CFLAGS -I$with_petsc/include $HDF5_INCLUDE $METIS_INCLUDE "
- LDFLAGS="$LDFLAGS -L$with_petsc/lib $HDF5_LDFLAGS $HDF5_LIBS $METIS_LIB -lmetis $SUITESPARSE_LIBS"
- CC=$CXX
-
- AC_LANG_SAVE
- AC_LANG_C
-
- AC_CHECK_HEADER([petsc.h],petsc_h=yes,## Copy LIB and include in the target directory
-AC_MSG_WARN([could not find header file petsc.h]))
- AC_CHECK_LIB([petsc],[PetscTrMalloc],petsc_lib=yes,AC_MSG_WARN([could not find libpetsc]))
-
- AC_LANG_RESTORE
-
- CFLAGS=$old_CFLAGS
- LDFLAGS=$old_LDFLAGS
- CC=$old_CC
-
- AC_MSG_CHECKING(PETSC in $with_petsc)
- if test x"$petsc_lib" = x"yes" -a x"$petsc_h" = x"yes" ; then
- AC_SUBST(PETSC_INCLUDE, [-I$with_petsc/include])
- AC_SUBST(PETSC_LIB, ["-L$with_petsc/lib -lpetsc"])
- AC_MSG_RESULT(ok)
- AC_DEFINE(HAVE_PETSC,1,[Define if you have PETSC library])
- else
- AC_MSG_RESULT(failed)
- fi
- fi
- #
- #
- #
- if test x = x"$PETSC_LIB" ; then
- ifelse([$2],,[],[$2])
- :
- else
- ifelse([$1],,[],[$1])
- :
- fi
- ])dnl AX_LIB_PETSC
diff --git a/m4/ax_suitesparse.m4 b/m4/ax_suitesparse.m4
deleted file mode 100644
index 7f97184de..000000000
--- a/m4/ax_suitesparse.m4
+++ /dev/null
@@ -1,131 +0,0 @@
-# ===========================================================================
-# http://www.gnu.org/software/autoconf-archive/ax_lapack.html
-# ===========================================================================
-#
-# SYNOPSIS
-#
-# AX_SUITESPARSE([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-#
-# DESCRIPTION
-#
-# This macro looks for SuiteSparse library (see http://www.netlib.org/lapack/)
-# On success, it sets the SUITESPARSE_LIBS output variable to hold the
-# requisite library linkages.
-#
-# To link with SUITESPARSE, you should link with:
-#
-# $SUITESPARSE_LIBS
-#
-# The user may also use --with-suitesparse=<lib> in order to use some specific
-# SuiteSparse library <lib>.
-#
-# ACTION-IF-FOUND is a list of shell commands to run if a SUITESPARSE library
-# is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it
-# is not found. If ACTION-IF-FOUND is not specified, the default action
-# will define HAVE_LAPACK.
-#
-# LICENSE
-#
-# Copyright (c) 2009 Steven G. Johnson <stevenj@alum.mit.edu>
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# You should have received a copy of the GNU General Public License along
-# with this program. If not, see <http://www.gnu.org/licenses/>.
-#
-# As a special exception, the respective Autoconf Macro's copyright owner
-# gives unlimited permission to copy, distribute and modify the configure
-# scripts that are the output of Autoconf when processing the Macro. You
-# need not follow the terms of the GNU General Public License when using
-# or distributing such scripts, even though portions of the text of the
-# Macro appear in them. The GNU General Public License (GPL) does govern
-# all other use of the material that constitutes the Autoconf Macro.
-#
-# This special exception to the GPL applies to versions of the Autoconf
-# Macro released by the Autoconf Archive. When you make and distribute a
-# modified version of the Autoconf Macro, you may extend this special
-# exception to the GPL to apply to your modified version as well.
-
-#serial 1
-
-AU_ALIAS([ACX_SUITESPARSE], [AX_SUITESPARSE])
-AC_DEFUN([AX_SUITESPARSE], [
-ax_suitesparse_ok=no
-
-AC_ARG_WITH(suitesparse,
- [AS_HELP_STRING([--with-suitesparse=directory], [use SuiteSparse directory])],[
- SUITESPARSE_LIBS="-L$with_suitesparse/lib"
- SUITESPARSE_INCLUDE="-I$with_suitesparse/include"
- ])
-
-#
-# Platform specific setup
-#
-#############################
-AC_CANONICAL_HOST
-# Check for which host we are on and setup a few things
-# specifically based on the host
-case $host_os in
- darwin* )
- RT_LIB=" $BLAS_LIBS"
- ;;
- linux*)
- RT_LIB="-lrt $BLAS_LIBS"
- ;;
- *)
- RT_LIB="-lrt $BLAS_LIBS"
- ;;
-esac
-
-# First, check SUITESPARSE_LIBS environment variable
-if test "x$SUITESPARSE_LIBS" != x; then
- save_LIBS="$LIBS"; LIBS="$SUITESPARSE_LIBS -lumfpack -lamd -lbtf -lcamd -lccolamd -lcholmod -lcolamd -lcxsparse -lklu -ldl -lrbio -lspqr -lsuitesparseconfig -lm $RT_LIB"
- AC_MSG_CHECKING([for umf_l_malloc])
- AC_TRY_LINK_FUNC(umf_l_malloc, [ax_suitesparse_ok=yes
- SUITESPARSE_LIBS="$SUITESPARSE_LIBS -lumfpack -lamd -lbtf -lcamd -lccolamd -lcholmod -lcolamd -lcxsparse -lklu -ldl -lrbio -lspqr -lsuitesparseconfig"
- ], [SUITRSPARSE_LIBS=""])
- AC_MSG_RESULT($ax_suitesparse_ok)
- LIBS="$save_LIBS"
- if test $ax_suitesparse_ok = no; then
- SUITESPARSE_LIBS=""
- fi
- old_CFLAGS="$CFLAGS"
- CFLAGS=$SUITESPARSE_INCLUDE
- AC_CHECK_HEADER(umfpack.h,[],[SUITESPARSE_INCLUDE=""
- ax_suitesparse_ok=no])
-
- CFLAGS="$old_CFLAGS"
-else
- AC_CHECK_LIB(umfpack,umf_l_alloc,[SUITESPARSE_LIBS="$SUITESPARSE_LIBS -lumfpack -lamd -lbtf -lcamd -lccolamd -lcholmod -lcolamd -lcxsparse -lklu -ldl -lrbio -lspqr -lsuitesparseconfig"],[
- SUITESPARSE_LIBS=""
- ax_suitesparse_ok=no
- ])
- old_CFLAGS="$CFLAGS"
- AC_CHECK_HEADER(umfpack.h,[],[SUITESPARSE_INCLUDE=""
- ax_suitesparse_ok=no])
-
-
- CFLAGS="$old_CFLAGS"
-fi
-
-AC_SUBST(SUITESPARSE_LIBS)
-AC_SUBST(SUITESPARSE_INCLUDE)
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x"$ax_suitesparse_ok" = xyes; then
- ifelse([$1],,AC_DEFINE(HAVE_SUITESPARSE,1,[Define if you have SUITESPARSE library.]),[$1])
- :
-else
- ax_suitesparse_ok=no
- $2
-fi
-])dnl AX_SUITESPARSE
-
diff --git a/m4/immdx_lib_metis.m4 b/m4/immdx_lib_metis.m4
deleted file mode 100644
index e8a3a681c..000000000
--- a/m4/immdx_lib_metis.m4
+++ /dev/null
@@ -1,82 +0,0 @@
-AC_DEFUN([IMMDX_LIB_METIS], [
- AC_MSG_CHECKING(for METIS library)
- AC_REQUIRE([AC_PROG_CC])
- #
- # User hints...
- #
- AC_ARG_VAR([METIS], [METIS library location])
- AC_ARG_WITH([metis],
- [AC_HELP_STRING([--with-metis],
- [user defined path to METIS library])],
- [
- if test -n "$METIS" ; then
- AC_MSG_RESULT(yes)
- with_metis=$METIS
- elif test "$withval" != no ; then
- AC_MSG_RESULT(yes)
- with_metis=$withval
- else
- AC_MSG_RESULT(no)
- fi
- ],
- [
- if test -n "$METIS" ; then
- with_metis=$METIS
- AC_MSG_RESULT(yes)
- else
- with_metis=/usr
- if test ! -f "$with_metis/include/metis.h" ; then
- with_metis=/usr/local
- if test ! -f "$with_metis/include/metis.h" ; then
- with_metis=""
- AC_MSG_RESULT(failed)
- else
- AC_MSG_RESULT(yes)
- fi
- else
- AC_MSG_RESULT(yes)
- fi
- fi
- ])
- #
- # locate METIS library
- #
- if test -n "$with_metis" ; then
- old_CFLAGS=$CFLAGS
- old_LDFLAGS=$LDFLAGS
- CFLAGS="-I$with_metis/include"
- LDFLAGS="-L$with_metis/lib"
-
- AC_LANG_SAVE
- AC_LANG_C
-
- AC_CHECK_LIB(metis, METIS_PartMeshDual,
- [metis_lib=yes], [metis_lib=yes], [-lm])
- AC_CHECK_HEADER(metis.h, [metis_h=yes],
- [metis_h=no], [/* check */])
-
- AC_LANG_RESTORE
-
- CFLAGS=$old_CFLAGS
- LDFLAGS=$old_LDFLAGS
-
- AC_MSG_CHECKING(METIS in $with_metis)
- if test "$metis_lib" = "yes" -a "$metis_h" = "yes" ; then
- AC_SUBST(METIS_INCLUDE, [-I$with_metis/include])
- AC_SUBST(METIS_LIB, [-L$with_metis/lib])
- AC_MSG_RESULT(ok)
- else
- AC_MSG_RESULT(failed)
- fi
- fi
- #
- #
- #
- if test x = x"$METIS_LIB" ; then
- ifelse([$2],,[AC_MSG_ERROR(Failed to find valid METIS library)],[$2])
- :
- else
- ifelse([$1],,[AC_DEFINE(HAVE_METIS,1,[Define if you have METIS library])],[$1])
- :
- fi
- ])dnl IMMDX_LIB_METIS
diff --git a/m4/immdx_lib_parmetis.m4 b/m4/immdx_lib_parmetis.m4
deleted file mode 100644
index e93b495c1..000000000
--- a/m4/immdx_lib_parmetis.m4
+++ /dev/null
@@ -1,88 +0,0 @@
-AC_DEFUN([IMMDX_LIB_PARMETIS], [
- AC_MSG_CHECKING(for PARMETIS library)
- AC_REQUIRE([AC_PROG_CC])
- #
- # User hints...
- #
- AC_ARG_VAR([PARMETIS], [PARMETIS library location])
- AC_ARG_WITH([parmetis],
- [AC_HELP_STRING([--with-parmetis],
- [user defined path to PARMETIS library])],
- [
- if test -n "$PARMETIS" ; then
- AC_MSG_RESULT(yes)
- with_parmetis=$PARMETIS
- elif test "$withval" != no ; then
- AC_MSG_RESULT(yes)
- with_parmetis=$withval
- else
- AC_MSG_RESULT(no)
- fi
- ],
- [
- if test -n "$PARMETIS" ; then
- with_parmetis=$PARMETIS
- AC_MSG_RESULT(yes)
- else
- with_parmetis=/usr
- if test ! -f "$with_parmetis/include/parmetis.h" ; then
- with_parmetis=/usr/local
- if test ! -f "$with_parmetis/include/parmetis.h" ; then
- with_parmetis=""
- AC_MSG_RESULT(failed)
- else
- AC_MSG_RESULT(yes)
- fi
- else
- AC_MSG_RESULT(yes)
- fi
- fi
- ])
- #
- # locate PARMETIS library
- #
- if test -n "$with_parmetis" ; then
- old_CC=$CC
- old_CFLAGS=$CFLAGS
- old_LDFLAGS=$LDFLAGS
- old_LIBS=$LIBS
- CFLAGS="-I$with_parmetis/include -I$with_metis/include"
- LDFLAGS="-L$with_parmetis/lib -L$with_metis/lib"
- CC=$CXX
- LIBS="-lmetis"
-
- AC_LANG_SAVE
- AC_LANG_C
-
- AC_CHECK_LIB(parmetis, ParMETIS_V3_PartKway,
- [parmetis_lib=yes], [parmetis_lib=yes], [-lm])
- AC_CHECK_HEADER(parmetis.h, [parmetis_h=yes],
- [parmetis_h=no], [/* check */])
-
- AC_LANG_RESTORE
-
- CFLAGS=$old_CFLAGS
- LDFLAGS=$old_LDFLAGS
- CC=$old_CC
- LIBS=$old_LIBS
-
- AC_MSG_CHECKING(PARMETIS in $with_parmetis)
- if test "$parmetis_lib" = "yes" -a "$parmetis_h" = "yes" ; then
- AC_SUBST(PARMETIS_INCLUDE, [-I$with_parmetis/include])
- AC_SUBST(PARMETIS_LIB, [-L$with_parmetis/lib])
- AC_MSG_RESULT(ok)
- else
- AC_MSG_RESULT(failed)
- fi
- fi
- #
- #
- #
- if test x = x"$PARMETIS_LIB" ; then
- ifelse([$2],,[AC_MSG_ERROR(Failed to find valid PARMETIS library)],[$2])
- :
- else
- ifelse([$1],,[AC_DEFINE(HAVE_PARMETIS,1,[Define if you have PARMETIS library])],[$1])
- :
- fi
- ])dnl IMMDX_LIB_PARMETIS
--
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