... | @@ -21,19 +21,7 @@ The Fixed decomposition just divide the domain as the user specified and assign |
... | @@ -21,19 +21,7 @@ The Fixed decomposition just divide the domain as the user specified and assign |
|
The data driven decomposition instead consider the volume of the information the structure store and divide the volume equally them equally regardless of the communication.
|
|
The data driven decomposition instead consider the volume of the information the structure store and divide the volume equally them equally regardless of the communication.
|
|
|
|
|
|
### Model decomposition
|
|
### Model decomposition
|
|
* A
|
|
|
|
* B
|
|
|
|
|
|
|
|
<div id="sliderFrame">
|
|
|
|
<div id="slider">
|
|
|
|
<img src="uploads/images/domain.jpg" alt="Initial domain" />
|
|
|
|
<img src="uploads/images/domain_decomposed.jpg" alt="Divide the space into a grid of sub-sub-domain" />
|
|
|
|
<img src="uploads/images/domain_graph.jpg" alt="Generate the graph model" />
|
|
|
|
<img src="uploads/images/domain_graph_decomposed.jpg" alt="Find optimal decomposition" />
|
|
|
|
<img src="uploads/images/domain_subdomain_decomposed.jpg" alt="Post process the decomposition" />
|
|
|
|
<img src="uploads/images/domain_subdomain_decomposed_wg.jpg" alt="Sub-domain creation" />
|
|
|
|
</div>
|
|
|
|
</div>
|
|
|
|
|
|
|
|
In a distributed-memory setting, where data are scattered across
|
|
In a distributed-memory setting, where data are scattered across
|
|
processors, two factors are important: equal division of work across
|
|
processors, two factors are important: equal division of work across
|
... | @@ -50,6 +38,17 @@ weights, and the sum of the cut edges is minimal (_Find optimal decomposition_). |
... | @@ -50,6 +38,17 @@ weights, and the sum of the cut edges is minimal (_Find optimal decomposition_). |
|
the decomposition can be post-process further more to be more optimal and based on factors not considered by the optimization process, like merging vertex, or merging sub-sub-domain, to create bigger sub-domains.
|
|
the decomposition can be post-process further more to be more optimal and based on factors not considered by the optimization process, like merging vertex, or merging sub-sub-domain, to create bigger sub-domains.
|
|
Even if a model decomposition it is not bind to a graph model it is true that until now it is the best approach in scientific computation
|
|
Even if a model decomposition it is not bind to a graph model it is true that until now it is the best approach in scientific computation
|
|
|
|
|
|
|
|
<div id="sliderFrame">
|
|
|
|
<div id="slider">
|
|
|
|
<img src="uploads/images/domain.jpg" alt="Initial domain" />
|
|
|
|
<img src="uploads/images/domain_decomposed.jpg" alt="Divide the space into a grid of sub-sub-domain" />
|
|
|
|
<img src="uploads/images/domain_graph.jpg" alt="Generate the graph model" />
|
|
|
|
<img src="uploads/images/domain_graph_decomposed.jpg" alt="Find optimal decomposition" />
|
|
|
|
<img src="uploads/images/domain_subdomain_decomposed.jpg" alt="Post process the decomposition" />
|
|
|
|
<img src="uploads/images/domain_subdomain_decomposed_wg.jpg" alt="Sub-domain creation" />
|
|
|
|
</div>
|
|
|
|
</div>
|
|
|
|
|
|
* CartDecomposition [(doc)](CartDecomposition)[(API reference)](http://ppmcore.mpi-cbg.de/doxygen/openfpm_pdata/classCartDecomposition.html)
|
|
* CartDecomposition [(doc)](CartDecomposition)[(API reference)](http://ppmcore.mpi-cbg.de/doxygen/openfpm_pdata/classCartDecomposition.html)
|
|
|
|
|
|
### Fixed decomposition
|
|
### Fixed decomposition
|
... | | ... | |