From 822bf8bf7dbaf3bf5fdad94e5a7e770b73e3b725 Mon Sep 17 00:00:00 2001
From: Adrian Nievergelt <nieverge@pigino-pc-6.mpi-cbg.de>
Date: Mon, 16 Dec 2019 15:07:38 +0100
Subject: [PATCH] corrected thickness bug

---
 cluster/ICON_fromImodFiles.slurm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/cluster/ICON_fromImodFiles.slurm b/cluster/ICON_fromImodFiles.slurm
index 19eb0b4..1a8dd42 100755
--- a/cluster/ICON_fromImodFiles.slurm
+++ b/cluster/ICON_fromImodFiles.slurm
@@ -35,7 +35,7 @@ binFactor=`grep -i "^IMAGEBINNED" tilt.com |sed -e 's/^[[:alnum:]]\+\s\+//g'`
 numSlicesFull=`grep -i "^FULLIMAGE" tilt.com |sed -e 's/^[[:alnum:]]\+\s\+[[:alnum:]]\+\s\+//g'`
 numSlices=$((numSlicesFull/binFactor-1))
 fullThickness=`grep -i "^THICKNESS" tilt.com |sed -e 's/^[[:alnum:]]\+\s\+//g'`
-thickness=$((numSlicesFull/binFactor))
+thickness=$((fullThickness/binFactor))
 
 mkdir -p $baseDir
 
-- 
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