New MPI + MAP on device finally working

configure.ac

@@ -412,6 +412,7 @@ if test x"$NVCC_EXIST" = x"yes"; then
   fi
 else
   gpu_support=no
+  INITIALIZATION_SOURCE="initialize_openfpm.cpp"
 fi
 
 if test x$gpu_support = x"no"; then

images/CartDecomposition_gen_vtk.cpp

@@ -13,7 +13,7 @@ int main(int argc, char ** argv)
 	openfpm_init(&argc,&argv);
 
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	//! [Create CartDecomposition vtk gen]
 	CartDecomposition<2,float> dec(vcl);

images/Makefile.am

 LINKLIBS = $(HDF5_LDFLAGS)  $(HDF5_LIBS) $(OPENMP_LDFLAGS) $(LIBHILBERT_LIB) $(PETSC_LIB) $(SUITESPARSE_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS)  $(METIS_LIB) $(PARMETIS_LIB)  $(PTHREAD_LIBS) $(OPT_LIBS) $(BOOST_LDFLAGS) $(BOOST_IOSTREAMS_LIB) $(CUDA_LIBS)
 
 noinst_PROGRAMS = cart_dec metis_dec dom_box vector_dist
-cart_dec_SOURCES = CartDecomposition_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
+cart_dec_SOURCES = CartDecomposition_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/CudaMemory.cu ../openfpm_devices/src/memory/HeapMemory.cpp  ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
 cart_dec_CXXFLAGS = -Wno-unknown-pragmas $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(PETSC_INCLUDE) $(METIS_INCLUDE) $(PARMETIS_INCLUDE) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) -I../src -Wno-unused-function -Wno-unused-local-typedefs
 cart_dec_CFLAGS = $(OPENMP_CFLAGS) $(CUDA_CFLAGS)
 cart_dec_LDADD = $(LINKLIBS) -lparmetis -lmetis
 
-metis_dec_SOURCES = Metis_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
+metis_dec_SOURCES = Metis_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/CudaMemory.cu  ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
 metis_dec_CXXFLAGS = -Wno-unknown-pragmas $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(PETSC_INCLUDE) $(METIS_INCLUDE) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) -I../src -Wno-unused-function -Wno-unused-local-typedefs
 metis_dec_CFLAGS = $(OPENMP_CFLAGS) $(CUDA_CFLAGS)
 metis_dec_LDADD = $(LINKLIBS) -lmetis
 
-dom_box_SOURCES = domain_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
+dom_box_SOURCES = domain_gen_vtk.cpp ../src/lib/pdata.cpp ../openfpm_devices/src/memory/CudaMemory.cu  ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/Memleak_check.cpp
 dom_box_CXXFLAGS = -Wno-unknown-pragmas $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(PETSC_INCLUDE) $(METIS_INCLUDE) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(BOOST_CPPFLAGS) -I../src -Wno-unused-function -Wno-unused-local-typedefs
 dom_box_CFLAGS = $(OPENMP_CFLAGS) $(CUDA_CFLAGS)
 dom_box_LDADD = $(LINKLIBS)
 
-vector_dist_SOURCES = vector.cpp ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_devices/src/Memleak_check.cpp
+vector_dist_SOURCES = vector.cpp ../openfpm_devices/src/memory/CudaMemory.cu  ../openfpm_devices/src/memory/HeapMemory.cpp ../openfpm_vcluster/src/VCluster/VCluster.cpp ../openfpm_devices/src/memory/PtrMemory.cpp ../openfpm_devices/src/Memleak_check.cpp
 vector_dist_CXXFLAGS = -Wno-unknown-pragmas $(OPENMP_CFLAGS) $(AM_CXXFLAGS) $(LIBHILBERT_INCLUDE) $(PETSC_INCLUDE) $(PARMETIS_INCLUDE) $(METIS_INCLUDE) $(CUDA_CFLAGS) $(INCLUDES_PATH) $(HDF5_CPPFLAGS) $(BOOST_CPPFLAGS) -I../src -Wno-unused-function -Wno-unused-local-typedefs
 vector_dist_CFLAGS = $(OPENMP_CFLAGS) $(CUDA_CFLAGS)
 vector_dist_LDADD = $(LINKLIBS) -lparmetis -lmetis

images/vector.cpp

@@ -50,9 +50,7 @@ int main(int argc, char* argv[])
 	// randomly in the domain, we create a Box that define our domain, boundary conditions, and ghost
 	//
 	openfpm_init(&argc,&argv);
-	Vcluster & v_cl = create_vcluster();
-	
-	typedef Point<2,float> s;
+	Vcluster<> & v_cl = create_vcluster();
 
 	// set the seed
 	// create the random generator engine

install

@@ -176,7 +176,6 @@ if [ $? -ne 0 ]; then
   exit 1
 fi
 
-
 ## check for options
 
 echo -e "\033[1;34;5mDEPENCENCIES INSTALLATION DIR      \033[0m"
@@ -317,6 +316,7 @@ HDF5_System_prv=1
 LIBHILBERT_installed=0
 conf_err=1
 
+
 if [ $install_req -eq 0 ]; then
     ./configure $options $configure_options "$configure_blas_option"
 else

openfpm_data @ 0261ed4b

-Subproject commit 66fdd0bdd308bd78efe3c14a7d2bf9290e35f550
+Subproject commit 0261ed4b804309864d899bedec46a67e5e6cfe95

openfpm_devices @ e5d5d31a

-Subproject commit c751d466195fd0271acf1933a6b0e9d2233d3529
+Subproject commit e5d5d31a0af09312118f72c0818a824443ba80fb

openfpm_vcluster @ 11a0f824

-Subproject commit ec95a342bc6fc783099f3cb044ff4524348bfedf
+Subproject commit 11a0f824c111e686ad2388cec485ffcaafab5560

script/detect_gcc

@@ -4,20 +4,6 @@ function haveProg() {
     [ -x "$(command -v $1)" ]
 }
 
-function gpp_clang()
-{
-    if [ x"$possible_solutions_command" == x"g++" ]; then
-        CXX=g++
-        CC=gcc
-        F77=gfortran
-        FC=gfortran
-    else
-        CXX=clang++
-        CC=clang
-        F77=gfortran
-        FC=gfortran
-    fi
-}
 
 function detect_compiler()
 {
@@ -25,6 +11,7 @@ function detect_compiler()
     icpc_found=0
     dgc_ret=0
 
+
      if [ x"$CXX" != x"" -o x"$CC" != x"" -o x"$F77" != x"" -o x"$FC" != x"" ]; then
 
         if [ x"$CXX" == x"" ]; then
@@ -65,6 +52,7 @@ function detect_compiler()
         return
     fi
 
+
     # First we try to understand if g++ command line is linked to clang
     if haveProg g++; then
 
@@ -111,6 +99,7 @@ function detect_compiler()
         fi
       fi
 
+
       g++ --version | grep "g++" > /dev/null 2>&1
       if [ $? == 0 -a $gpp_found -ne 1 ]; then
         dgc_major=$(g++ --version | grep g++ | sed 's/.*\([0-9][0-9]*\)\.\([0-9][0-9]*\)\.\([0-9][0-9]*\).*/\1/g')
@@ -147,6 +136,7 @@ function detect_compiler()
         fi
       fi
 
+
       g++ --version | grep "clang" > /dev/null 2>&1
       if [ $? == 0 -a $gpp_found -ne 1 ]; then
         dgc_major=$(g++ --version | grep g++ | sed 's/.*\([0-9][0-9]*\)\.\([0-9][0-9]*\)\.\([0-9][0-9]*\).*/\1/g')
@@ -224,11 +214,17 @@ function detect_compiler()
           FC=ifort
           dgc_compiler=icpc
         else
-          gpp_clang
+          CXX=g++
+          CC=gcc
+          F77=gfortran
+          FC=gfortran
         fi
         dgc_ret=1
     elif [ $gpp_found -eq 1 ]; then
-        gpp_clang
+        CXX=g++
+        CC=gcc
+        F77=gfortran
+        FC=gfortran
     elif [ $icpc_found -eq 1 ]; then
           CXX=icpc
           CC=icc

script/install_MPI.sh

@@ -25,7 +25,8 @@ cd openmpi-3.1.1
 #
 #
 
-./configure --with-cuda --prefix=$1/MPI --enable-mpi-fortran=yes CC=$3 CXX=$4 F77=$4 FC=$5
+
+./configure --with-cuda --prefix=$1/MPI --enable-mpi-fortran=yes CC=$3 CXX=$4 F77=$5 FC=$5
 make -j $2
 make install
 

script/remove_old

@@ -191,7 +191,7 @@ function remove_old()
         version=$(cat $1/MPI/version)
         if [ x"$version" != x"3"  ]; then
             echo -e "\033[1;34;5m  -------------------------------------------------------------------------------------- \033[0m"
-            echo -e "\033[1;34;5m  MPI has been updated to version 2.1.1, the component will be updated automatically      \033[0m"
+            echo -e "\033[1;34;5m  MPI has been updated to version 3.1.1, the component will be updated automatically      \033[0m"
             echo -e "\033[1;34;5m  -------------------------------------------------------------------------------------- \033[0m"
             sleep 5
             rm -rf $1/MPI/include

src/DLB/DLB.hpp

@@ -69,7 +69,7 @@ public:
 private:
 
 	//! Runtime virtual cluster machine
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Structure that will contain all the timings
 	Times timeInfo;
@@ -165,7 +165,7 @@ public:
 	 *
 	 * \param v_cl virtual cluster object
 	 */
-	DLB(Vcluster & v_cl) :
+	DLB(Vcluster<> & v_cl) :
 			v_cl(v_cl)
 	{
 	}

src/Decomposition/CartDecomposition.hpp

@@ -197,7 +197,7 @@ protected:
 	size_t magn[dim];
 
 	//! Runtime virtual cluster machine
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Create distribution
 	Distribution dist;
@@ -353,7 +353,7 @@ public:
 	 * \param opt option (one option is to construct)
 	 *
 	 */
-	void createSubdomains(Vcluster & v_cl, const size_t (& bc)[dim], size_t opt = 0)
+	void createSubdomains(Vcluster<> & v_cl, const size_t (& bc)[dim], size_t opt = 0)
 	{
 		int p_id = v_cl.getProcessUnitID();
 
@@ -708,7 +708,7 @@ public:
 	 * \param v_cl Virtual cluster, used internally to handle or pipeline communication
 	 *
 	 */
-	CartDecomposition(Vcluster & v_cl)
+	CartDecomposition(Vcluster<> & v_cl)
 	:nn_prcs<dim, T>(v_cl), v_cl(v_cl), dist(v_cl),ref_cnt(0)
 	{
 		// Reset the box to zero
@@ -1622,6 +1622,31 @@ public:
 		return processorID<Mem>(pt) == v_cl.getProcessUnitID();
 	}
 
+	/*! \brief Check if the particle is local considering boundary conditions
+	 *
+	 * \warning if the particle id outside the domain and non periodic boundary the result
+	 *          is unreliable
+	 *
+	 *
+	 * \param p object position
+	 * \param bc boundary conditions
+	 *
+	 * \return true if it is local
+	 *
+	 */
+	bool isLocalBC(const Point<dim,T> & p, const size_t (& bc)[dim]) const
+	{
+		Point<dim,T> pt = p;
+
+		for (size_t i = 0 ; i < dim ; i++)
+		{
+			if (bc[i] == PERIODIC)
+				pt.get(i) = openfpm::math::periodic_l(p[i],domain.getHigh(i),domain.getLow(i));
+		}
+
+		return processorID(pt) == v_cl.getProcessUnitID();
+	}
+
 	/*! \brief Get the domain Cells
 	 *
 	 * It return all the cells-id that are inside the processor-domain
@@ -1789,7 +1814,7 @@ public:
 	 * \return the Virtual cluster machine
 	 *
 	 */
-	Vcluster & getVC() const
+	Vcluster<> & getVC() const
 	{
 #ifdef SE_CLASS2
 		check_valid(this,8);

src/Decomposition/CartDecomposition_ext.hpp

@@ -167,7 +167,7 @@ public:
 	 * \param v_cl VCluster
 	 *
 	 */
-	CartDecomposition_ext(Vcluster & v_cl)
+	CartDecomposition_ext(Vcluster<> & v_cl)
 	:CartDecomposition<dim,T,Memory,layout_base,Distribution>(v_cl)
 	{
 	}

src/Decomposition/Distribution/DistParMetisDistribution.hpp

@@ -17,7 +17,7 @@ template<unsigned int dim, typename T>
 class DistParMetisDistribution
 {
 	//! Vcluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Structure that store the cartesian grid information
 	grid_sm<dim, void> gr;
@@ -73,7 +73,7 @@ public:
 	 *
 	 * @param v_cl Vcluster to use as communication object in this class
 	 */
-	DistParMetisDistribution(Vcluster & v_cl) :
+	DistParMetisDistribution(Vcluster<> & v_cl) :
 			v_cl(v_cl), parmetis_graph(v_cl, v_cl.getProcessingUnits()), vtxdist(v_cl.getProcessingUnits() + 1), partitions(v_cl.getProcessingUnits()), v_per_proc(v_cl.getProcessingUnits())
 
 	{

src/Decomposition/Distribution/Distribution_unit_tests.hpp

@@ -59,7 +59,7 @@ BOOST_AUTO_TEST_SUITE (Distribution_test)
 
 BOOST_AUTO_TEST_CASE( Metis_distribution_test)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	if (v_cl.getProcessingUnits() != 3)
 	return;
@@ -180,7 +180,7 @@ BOOST_AUTO_TEST_CASE( Metis_distribution_test)
 
 BOOST_AUTO_TEST_CASE( Parmetis_distribution_test)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	if (v_cl.getProcessingUnits() != 3)
 	return;
@@ -286,7 +286,7 @@ BOOST_AUTO_TEST_CASE( Parmetis_distribution_test)
 
 BOOST_AUTO_TEST_CASE( DistParmetis_distribution_test)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	if (v_cl.getProcessingUnits() != 3)
 		return;
@@ -387,7 +387,7 @@ BOOST_AUTO_TEST_CASE( DistParmetis_distribution_test)
 
 BOOST_AUTO_TEST_CASE( Space_distribution_test)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	if (v_cl.getProcessingUnits() != 3)
 		return;

src/Decomposition/Distribution/MetisDistribution.hpp

@@ -30,7 +30,7 @@ template<unsigned int dim, typename T>
 class MetisDistribution
 {
 	//! Vcluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Structure that store the cartesian grid information
 	grid_sm<dim, void> gr;
@@ -111,7 +111,7 @@ public:
 	 * \param v_cl vcluster
 	 *
 	 */
-	MetisDistribution(Vcluster & v_cl)
+	MetisDistribution(Vcluster<> & v_cl)
 	:v_cl(v_cl),metis_graph(gp)
 	{
 #ifdef SE_CLASS2

src/Decomposition/Distribution/ParMetisDistribution.hpp

@@ -39,7 +39,7 @@ class ParMetisDistribution
 	bool is_distributed = false;
 
 	//! Vcluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Structure that store the cartesian grid information
 	grid_sm<dim, void> gr;
@@ -283,7 +283,7 @@ public:
 	 *
 	 * \param v_cl Vcluster to use as communication object in this class
 	 */
-	ParMetisDistribution(Vcluster & v_cl)
+	ParMetisDistribution(Vcluster<> & v_cl)
 	:is_distributed(false),v_cl(v_cl), parmetis_graph(v_cl, v_cl.getProcessingUnits()), vtxdist(v_cl.getProcessingUnits() + 1), partitions(v_cl.getProcessingUnits()), v_per_proc(v_cl.getProcessingUnits())
 	{
 	}

src/Decomposition/Distribution/SpaceDistribution.hpp

@@ -24,7 +24,7 @@ template<unsigned int dim, typename T>
 class SpaceDistribution
 {
 	//! Vcluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Structure that store the cartesian grid information
 	grid_sm<dim, void> gr;
@@ -42,7 +42,7 @@ public:
 	 *
 	 * \param v_cl Vcluster to use as communication object in this class
 	 */
-	SpaceDistribution(Vcluster & v_cl)
+	SpaceDistribution(Vcluster<> & v_cl)
 	:v_cl(v_cl)
 	{
 	}

src/Decomposition/Distribution/metis_util_unit_test.hpp

@@ -25,7 +25,7 @@ BOOST_AUTO_TEST_SUITE( Metis_test )
 
 BOOST_AUTO_TEST_CASE( Metis_test_use)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	if (v_cl.getProcessingUnits() != 3)
 		return;

src/Decomposition/Distribution/parmetis_dist_util.hpp

@@ -103,7 +103,7 @@ class DistParmetis
 	MPI_Comm comm = (MPI_Comm)NULL;
 
 	//! VCluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Process rank information
 	int p_id = 0;
@@ -178,7 +178,7 @@ public:
 	 * \param nc number of partitions
 	 *
 	 */
-	DistParmetis(Vcluster & v_cl, size_t nc) :
+	DistParmetis(Vcluster<> & v_cl, size_t nc) :
 			v_cl(v_cl), nc(nc)
 	{
 		// TODO Move into VCluster

src/Decomposition/Distribution/parmetis_util.hpp

@@ -108,7 +108,7 @@ class Parmetis
 	MPI_Comm comm = (MPI_Comm)NULL;
 
 	//! VCluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	//! Process rank information
 	int p_id = 0;
@@ -210,7 +210,7 @@ public:
 	 * \param nc number of partitions
 	 *
 	 */
-	Parmetis(Vcluster & v_cl, size_t nc)
+	Parmetis(Vcluster<> & v_cl, size_t nc)
 	:v_cl(v_cl), nc(nc),n_dec(0)
 	{
 #ifdef SE_CLASS1

src/Decomposition/ORB.hpp

@@ -98,7 +98,7 @@ template<unsigned int dim, typename T, typename loc_wg=openfpm::vector<float>, t
 class ORB
 {
 	// Virtual cluster
-	Vcluster & v_cl;
+	Vcluster<> & v_cl;
 
 	// particle coordinate accumulator
 	openfpm::vector<T> cm;

src/Decomposition/cuda/CartDecomposition_gpu.cuh

@@ -20,6 +20,7 @@ __global__ void process_id_proc_each_part(cartdec_gpu cdg, particles_type parts,
 	Point<3,float> xp = parts.template get<0>(p);
 
 	int pr = cdg.processorIDBC(xp);
+
 	output.template get<1>(p) = (pr == rank)?-1:pr;
 	output.template get<0>(p) = p;
 }
@@ -55,6 +56,8 @@ __device__ __host__ inline int processorID_impl(T2 & p, fine_s_type & fine_s, vs
 
 #endif
 
+
+
 	return sub_domains_global.template get<1>(e);
 }
 

src/Decomposition/cuda/decomposition_cuda_tests.cu

@@ -14,7 +14,7 @@ BOOST_AUTO_TEST_CASE( decomposition_to_gpu_test_use )
 	auto & v_cl = create_vcluster();
 
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	CartDecomposition<3, float, CudaMemory, memory_traits_inte> dec(vcl);
 

src/Decomposition/dec_optimizer_unit_test.hpp

@@ -135,7 +135,7 @@ BOOST_AUTO_TEST_CASE( dec_optimizer_test_use_p)
 BOOST_AUTO_TEST_CASE( dec_optimizer_disconnected_subdomains_np)
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	// Test for only 3 processors
 	if (vcl.getProcessingUnits() != 3)

src/Decomposition/ie_ghost.hpp

@@ -140,7 +140,7 @@ class ie_ghost
 	* \note To an explanation about the sectors see getShiftVectors
 	*
 	*/
-	inline size_t ebx_ibx_form(size_t k, size_t b, size_t p_id, const comb<dim> & c ,size_t N_b, Vcluster & v_cl, const bool ei)
+	inline size_t ebx_ibx_form(size_t k, size_t b, size_t p_id, const comb<dim> & c ,size_t N_b, Vcluster<> & v_cl, const bool ei)
 	{
 		comb<dim> cext = c;
 
@@ -192,7 +192,7 @@ protected:
 	 * \see calculateGhostBoxes
 	 *
 	 */
-	void create_box_nn_processor_ext(Vcluster & v_cl,
+	void create_box_nn_processor_ext(Vcluster<> & v_cl,
 			                         Ghost<dim,T> & ghost,
 									 openfpm::vector<SpaceBox<dim,T>> & sub_domains,
 									 const openfpm::vector<openfpm::vector<long unsigned int> > & box_nn_processor,
@@ -293,7 +293,7 @@ protected:
 	 * \see calculateGhostBoxes
 	 *
 	 */
-	void create_box_nn_processor_int(Vcluster & v_cl,
+	void create_box_nn_processor_int(Vcluster<> & v_cl,
 			                         Ghost<dim,T> & ghost,
 									 openfpm::vector<SpaceBox<dim,T>> & sub_domains,
 									 const openfpm::vector<openfpm::vector<long unsigned int> > & box_nn_processor,

src/Decomposition/nn_processor_unit_test.hpp

@@ -12,7 +12,7 @@
 
 void create_decomposition2x2(openfpm::vector<openfpm::vector<long unsigned int>> & box_nn_processor, openfpm::vector<SpaceBox<2,float>> & sub_domains)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	box_nn_processor.add();
 
@@ -54,7 +54,7 @@ BOOST_AUTO_TEST_SUITE( nn_processor_test )
 
 BOOST_AUTO_TEST_CASE( nn_processor_np_test)
 {
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	/*!
 	 *
@@ -202,7 +202,7 @@ BOOST_AUTO_TEST_CASE( nn_processor_np_test)
 BOOST_AUTO_TEST_CASE( nn_processor_box_periodic_test)
 {
 	// Vcluster
-	Vcluster & v_cl = create_vcluster();
+	Vcluster<> & v_cl = create_vcluster();
 
 	/*!
 	 *

src/Decomposition/tests/CartDecomposition_unit_test.cpp

@@ -55,7 +55,7 @@ void setComputationCosts3D(CartDecomposition<3, float> &dec, size_t n_v, Point<3
 BOOST_AUTO_TEST_CASE( CartDecomposition_non_periodic_test)
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	CartDecomposition<3, float> dec(vcl);
 
@@ -144,7 +144,7 @@ BOOST_AUTO_TEST_CASE( CartDecomposition_non_periodic_test)
 BOOST_AUTO_TEST_CASE( CartDecomposition_periodic_test)
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	//! [Create CartDecomposition]
 	CartDecomposition<3, float> dec(vcl);
@@ -239,7 +239,7 @@ BOOST_AUTO_TEST_CASE( CartDecomposition_periodic_test)
 BOOST_AUTO_TEST_CASE( CartDecomposition_ext_non_periodic_test)
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	CartDecomposition<3,float> dec(vcl);
 
@@ -344,7 +344,7 @@ BOOST_AUTO_TEST_CASE( CartDecomposition_ext_non_periodic_test)
 BOOST_AUTO_TEST_CASE( CartDecomposition_check_cross_consistency_between_proc_idbc_and_ghost )
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	if (vcl.size() != 3)
 	{return;}
@@ -392,7 +392,7 @@ BOOST_AUTO_TEST_CASE( CartDecomposition_check_cross_consistency_between_proc_idb
 BOOST_AUTO_TEST_CASE( CartDecomposition_check_cross_consistency_between_proc_idbc_and_ghost2 )
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	CartDecomposition<3, double> dec(vcl);
 
@@ -488,7 +488,7 @@ BOOST_AUTO_TEST_CASE( CartDecomposition_check_cross_consistency_between_proc_idb
 BOOST_AUTO_TEST_CASE( CartDecomposition_non_periodic_test_dist_grid)
 {
 	// Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	CartDecomposition<3, float> dec(vcl);
 

src/Graph/DistGraphFactory.hpp

@@ -240,7 +240,7 @@ public:
 	//! Construct Cartesian graph
 	static Graph construct(const size_t (&sz)[dim], Box<dim, T> dom)
 	{
-		Vcluster &v_cl = create_vcluster();
+		Vcluster<> &v_cl = create_vcluster();
 
 		// Calculate the size of the hyper-cubes on each dimension
 		T szd[dim];
@@ -394,7 +394,7 @@ public:
 	//! Construct Cartesian graph
 	static Graph construct(const size_t (&sz)[dim], Box<dim, T> dom)
 	{
-		Vcluster &v_cl = create_vcluster();
+		Vcluster<> &v_cl = create_vcluster();
 
 		// Calculate the size of the hyper-cubes on each dimension
 

src/Graph/dist_map_graph.hpp

@@ -209,7 +209,7 @@ template<typename V, typename E = no_edge,
 class DistGraph_CSR
 {
 	//! Vcluster communication object
-	Vcluster & vcl;
+	Vcluster<> & vcl;
 
 	//! Distribution vector
 	openfpm::vector<idx_t> vtxdist;
@@ -1147,7 +1147,7 @@ public:
 	 * \param gg distributed graph to copy
 	 *
 	 */
-	DistGraph_CSR(Vcluster & vcl, DistGraph_CSR<V, E, Memory> && g) :
+	DistGraph_CSR(Vcluster<> & vcl, DistGraph_CSR<V, E, Memory> && g) :
 			vcl(vcl)
 	{
 		swap(g);

src/Graph/dist_map_graph_unit_test.hpp

@@ -127,7 +127,7 @@ BOOST_AUTO_TEST_CASE( dist_map_graph_use)
 {
 
 	//! Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	if(vcl.getProcessingUnits() != 4)
 		return;
@@ -241,7 +241,7 @@ BOOST_AUTO_TEST_CASE( dist_map_graph_use)
 BOOST_AUTO_TEST_CASE( dist_map_graph_use_redistribution)
 {
 	//! Vcluster
-	Vcluster & vcl = create_vcluster();
+	Vcluster<> & vcl = create_vcluster();
 
 	if(vcl.getProcessingUnits() != 4)