Fixing examples

CHANGELOG.md

 # Change Log
 All notable changes to this project will be documented in this file.
 
-## [0.2.0] - 2015-02-17
+## [0.2.0] - 2016-03-25
 ### Added
+- Added Load Balancing and Dynamic Load Balancing on Beta
 - PSE 1D example with multiple precision
 - Plot example for GoogleChart plotting
 - Distributed data structure now support 128bit floating point precision (on Beta)
-- OpenFPM support for Microsoft Windows (Cygwin) compilation
 
 ### Fixed
 - Detection 32 bit system and report as an error
+- Bug in rounding off for periodic boundary condition
 
 ### Changed
 - Nothing to report
 
-## [0.1.0] - 2015-02-05
+## [0.1.0] - 2016-02-05
 ### Added
 - PSE 1D example
 - Cell list example

example/Numerics/Agent_sim/main.cpp

@@ -3,7 +3,7 @@
  *
  * ## Simple example
  *
- * In this example we show 1D PSE derivative function approximation
+ * In this example show an agent based simulation
  *
  * ### WIKI END ###
  *

example/Numerics/PSE/0_Derivative_approx_1D/main.cpp

@@ -78,7 +78,7 @@ int main(int argc, char* argv[])
 	const double eps = 2*spacing;
 
 	// Laplacian PSE kernel 1 dimension, on double, second order
-	Lap<1,double,2> lker(eps);
+	Lap_PSE<1,double,2> lker(eps);
 
 	//
 	// ### WIKI 2 ###

install

@@ -254,10 +254,10 @@ fi
 
 ### Create example.mk
 install_base=$(cat install_dir)
-echo "INCLUDE_PATH=-I. -I$install_base/openfpm_numerics/include -I$install_base/openfpm_pdata/include/config -I$install_base/openfpm_pdata/include -I$install_base/openfpm_data/include -I$install_base/openfpm_vcluster/include -I$install_base/openfpm_io/include -I$install_base/openfpm_devices/include -I$i_dir/METIS/include -I$i_dir/PARMETIS/include -I$i_dir/BOOST/include" > example.mk
-echo "LIBS_PATH= -L$install_base/openfpm_devices/lib -L$install_base/openfpm_pdata/lib  -L$install_base/openfpm_vcluster/lib -L$i_dir/METIS/lib -L$i_dir/PARMETIS/lib  -L$i_dir/BOOST/lib " >> example.mk
-echo "LIBS=-lvcluster -lofpm_pdata -lofpmmemory -lmetis -lparmetis -lboost_iostreams" >> example.mk
-echo "LIBS_SE2=-lvcluster -lofpmmemory_se2 -lparmetis -lmetis -lboost_iostreams" >> example.mk
+echo "INCLUDE_PATH=-I. -I$install_base/openfpm_numerics/include -I$install_base/openfpm_pdata/include/config -I$install_base/openfpm_pdata/include -I$install_base/openfpm_data/include -I$install_base/openfpm_vcluster/include -I$install_base/openfpm_io/include -I$install_base/openfpm_devices/include -I$i_dir/METIS/include -I$i_dir/PARMETIS/include -I$i_dir/BOOST/include -I$i_dir/HDF5/include" > example.mk
+echo "LIBS_PATH= -L$install_base/openfpm_devices/lib -L$install_base/openfpm_pdata/lib  -L$install_base/openfpm_vcluster/lib -L$i_dir/METIS/lib -L$i_dir/PARMETIS/lib  -L$i_dir/BOOST/lib -L$i_dir/HDF5/lib" >> example.mk
+echo "LIBS=-lvcluster -lofpm_pdata -lofpmmemory -lmetis -lparmetis -lboost_iostreams -lhdf5" >> example.mk
+echo "LIBS_SE2=-lvcluster -lofpmmemory_se2 -lparmetis -lmetis -lboost_iostreams -lhdf5" >> example.mk
 cp example.mk src/example.mk
 cp example.mk example/example.mk
 

script/install_Parmetis.sh

@@ -7,6 +7,9 @@ if [ -d "$1/PARMETIS" ]; then
   exit 0
 fi
 
+## Remove old download
+rm -rf parmetis-4.0.3
+
 wget http://ppmcore.mpi-cbg.de/upload/parmetis-4.0.3.tar.gz
 tar -xf parmetis-4.0.3.tar.gz
 cd parmetis-4.0.3