Adding jenkins pipeline

Jenkinsfile

+#!groovy
+
+parallel (
+
+
+"nyu" : {node ('nyu')
+                  {
+                    deleteDir()
+                    checkout scm
+                    stage ('build_nyu')
+                    {
+                      sh "./build.sh $WORKSPACE $NODE_NAME"
+                    }
+
+                    stage ('run_nyu')
+                    {
+		      parallel(
+                        "proc2" : {sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 2"}
+                        "proc3" : {sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 3"}
+                      )
+
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 4"
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 5"
+                    }
+                  }
+                 },
+
+
+
+
+"sb15" : {node ('sbalzarini-mac-15')
+                  {
+                    deleteDir()
+                    env.PATH = "/usr/local/bin:${env.PATH}"
+                    checkout scm
+                    stage ('build_sb15')
+                    {
+                      sh "./build.sh $WORKSPACE $NODE_NAME NO"
+                    }
+
+                    stage ('run_sb15')
+                    {
+                      parallel(
+                        "proc2" : {sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 2"}
+                        "proc3" : {sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 3"}
+                      )
+
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 4"
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 5"
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 6"
+                      sh "cd openfpm_data && ./run.sh $WORKSPACE $NODE_NAME 7"
+                    }
+                  }
+                 }
+
+)
+

build.sh

+#! /bin/bash
+
+# Make a directory in /tmp/openfpm_data
+
+echo "$PATH"
+echo "Directory: $1"
+echo "Machine: $2"
+
+mkdir /tmp/openfpm_vcluster
+mv * .[^.]* /tmp/openfpm_vcluster
+mv /tmp/openfpm_vcluster openfpm_vcluster
+
+mkdir openfpm_vcluster/src/config
+
+git clone git@ppmcore.mpi-cbg.de:/incardon/openfpm_devices.git openfpm_devices
+git clone git@ppmcore.mpi-cbg.de:/incardon/openfpm_data.git openfpm_data
+
+cd "$1/openfpm_vcluster"
+
+if [ "$2" == "gin" ]; then
+ echo "Compiling on gin\n"
+ module load gcc/4.9.2
+ module load openmpi/1.8.1
+
+elif [ "$2" == "wetcluster" ]; then
+ echo "Compiling on wetcluster"
+
+## produce the module path
+
+ export MODULEPATH="/sw/apps/modules/modulefiles:$MODULEPATH"
+
+ script="module load gcc/4.9.2\n 
+module load openmpi/1.8.1\n
+module load boost/1.54.0\n
+compile_options='--with-boost=/sw/apps/boost/1.54.0/'\n
+\n
+sh ./autogen.sh\n
+sh ./configure \"\$compile_options\"  CXX=mpic++\n
+make\n
+if [ \"\$?\" = "0" ]; then exit 1 ; fi\n
+exit(0)\n"
+
+ echo $script | sed -r 's/\\n/\n/g' > compile_script
+
+ bsub -o output_compile.%J -K -n 1 -J compile sh ./compile_script
+
+elif [ "$2" == "taurus" ]; then
+ echo "Compiling on taurus"
+
+ echo "$PATH"
+ module load gcc/5.3.0
+ module load boost/1.60.0
+ module load openmpi/1.10.2-gnu
+ module unload bullxmpi
+
+ sh ./autogen.sh
+ sh ./configure --with-boost=/sw/taurus/libraries/boost/1.55.0-gnu4.8  CXX=mpic++
+ make
+ if [ $? -ne 0 ]; then exit 1 ; fi
+
+### to exclude --exclude=taurusi[6300-6400],taurusi[5400-5500]
+
+else
+
+ source $HOME/.bashrc
+ echo "$PATH"
+ echo "Compiling general"
+ sh ./autogen.sh
+ sh ./configure  CXX=mpic++
+ make
+ if [ $? -ne 0 ]; then exit 1 ; fi
+
+fi
+

run.sh

+#! /bin/bash
+
+# Make a directory in /tmp/openfpm_data
+
+echo "$PATH"
+echo "Directory: $1"
+echo "Machine: $2"
+
+cd "$1/openfpm_vcluster"
+
+if [ "$2" == "wetcluster" ]; then
+
+ export MODULEPATH="/sw/apps/modules/modulefiles:$MODULEPATH"
+
+ ## Run on the cluster
+ bsub -o output_run2.%J -K -n 2 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 2 ./src/vcluster"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ bsub -o output_run4.%J -K -n 4 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 4 ./src/vcluster"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ bsub -o output_run8.%J -K -n 8 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 8 ./src/vcluster"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ bsub -o output_run12.%J -K -n 12 -R "span[hosts=1]" "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 12 ./src/vcluster"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ # bsub -o output_run32.%J -K -n 32 "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 32 ./src/vcluster"
+ # if [ $? -ne 0 ]; then exit 1 ; fi
+ # bsub -o output_run32.%J -K -n 64 "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 64 ./src/vcluster"
+ # if [ $? -ne 0 ]; then exit 1 ; fi
+ # bsub -o output_run32.%J -K -n 128 "module load openmpi/1.8.1 ; module load gcc/4.9.2;  mpirun -np 128 ./src/vcluster"
+ # if [ $? -ne 0 ]; then exit 1 ; fi
+elif [ "$2" == "taurus" ]; then
+ echo "Running on taurus"
+
+ echo "$PATH"
+ module load gcc/5.3.0
+ module load boost/1.60.0
+ module load openmpi/1.10.2-gnu
+ module unload bullxmpi
+
+### to exclude --exclude=taurusi[6300-6400],taurusi[5400-5500]
+
+ salloc --nodes=1 --ntasks-per-node=24 --time=00:05:00 --mem-per-cpu=1800 --partition=haswell bash -c "ulimit -s unlimited && mpirun -np 24 src/vcluster --report_level=no"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ sleep 5
+ salloc --nodes=2 --ntasks-per-node=24 --time=00:05:00 --mem-per-cpu=1800 --partition=haswell bash -c "ulimit -s unlimited && mpirun -np 48 src/vcluster --report_level=no"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ sleep 5
+ salloc --nodes=4 --ntasks-per-node=24 --time=00:05:00 --mem-per-cpu=1800 --partition=haswell bash -c "ulimit -s unlimited && mpirun -np 96 src/vcluster --report_level=no"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ sleep 5
+ salloc --nodes=8 --ntasks-per-node=24 --time=00:05:00 --mem-per-cpu=1800 --partition=haswell bash -c "ulimit -s unlimited && mpirun -np 192 src/vcluster --report_level=no"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ sleep 5
+ salloc --nodes=10 --ntasks-per-node=24 --time=00:5:00 --mem-per-cpu=1800 --partition=haswell bash -c "ulimit -s unlimited && mpirun -np 240 src/vcluster --report_level=no"
+ if [ $? -ne 0 ]; then exit 1 ; fi
+
+else
+
+ source $HOME/.bashrc
+ echo "$PATH"
+
+ mpirun -np 2 ./src/vcluster
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ mpirun -np 3 ./src/vcluster
+ if [ $? -ne 0 ]; then exit 1 ; fi
+ mpirun -np 4 ./src/vcluster
+ if [ $? -ne 0 ]; then exit 1 ; fi
+fi
+
+curl -X POST --data "payload={\"icon_emoji\": \":jenkins:\", \"username\": \"jenkins\"  , \"attachments\":[{ \"title\":\"Info:\", \"color\": \"#00FF00\", \"text\":\"$2 completed succeffuly the openfpm_vcluster test \" }] }" https://hooks.slack.com/services/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