Commit c92d7066 authored by Holger Brandl's avatar Holger Brandl

fixed missing arg in template

parent 43c794ad
......@@ -132,7 +132,7 @@ mcdir ${PRJ_DATA}/dge_analysis
#
rend.R -e ${NGS_TOOLS}/dge_workflow/featcounts_deseq_mf.R ../alignments/star_counts_matrix.txt 2>&1 | tee featcounts_deseq.log
rend.R -e ${NGS_TOOLS}/dge_workflow/featcounts_deseq_mf.R ../alignments/star_counts_matrix.txt ${PRJ_DATA}/lanereps_pooled/basic_design.txt 2>&1 | tee featcounts_deseq.log
#rend.R -e ${NGS_TOOLS}/dge_workflow/featcounts_deseq_mf.R --design 'batch+sample' --pcutoff 0.01 --contrasts ../contrasts_wt.txt ../qseq.counts.txt ../qseq.design_matrix.txt 2>&1 | tee featcounts_deseq_mf.log
......
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