Start staggered grid

configure.ac

@@ -16,7 +16,7 @@ m4_ifdef([AX_OPENMP],,[m4_include([m4/ax_openmp.m4])])
 m4_ifdef([AX_CUDA],,[m4_include([m4/ax_cuda.m4])])
 m4_ifdef([IMMDX_LIB_METIS],,[m4_include([m4/immdx_lib_metis.m4])])
 
-CXXFLAGS+=" --std=c++11 -march=native -mtune=native "
+CXXFLAGS+=" --std=c++11 "
 NVCCFLAGS=" "
 INCLUDES_PATH=" "
 

install

@@ -42,6 +42,10 @@ METIS_installed=0
 BOOST_installed=0
 conf_err=1
 
+## Check for mpirun
+
+
+
 if [ $install_req -eq 0 ]; then
     ./configure $configure_options
 else

script/install_BOOST.sh

@@ -7,10 +7,10 @@ if [ -d "${HOME}/BOOST" ]; then
   exit 0
 fi
 
-mkdir ${HOME}/BOOST
 wget http://ppmcore.mpi-cbg.de/upload/boost_1_58_0.tar.bz2
 tar -xvf boost_1_58_0.tar.bz2
 cd boost_1_58_0
 ./bootstrap.sh
+mkdir ${HOME}/BOOST
 ./b2 -j 4 install --prefix=$HOME/BOOST
 

script/install_MPI.sh

@@ -7,10 +7,10 @@ if [ -d "${HOME}/MPI" ]; then
   exit 0
 fi
 
-mkdir ${HOME}/MPI
 wget http://www.open-mpi.de/software/ompi/v1.8/downloads/openmpi-1.8.7.tar.bz2
 tar -xvf openmpi-1.8.7.tar.bz2
 cd openmpi-1.8.7
 sh ./configure --prefix=${HOME}/MPI --enable-opal-multi-threads --enable-mpi-f90
 make -j 4
+mkdir ${HOME}/MPI
 make install

script/install_Metis.sh

@@ -7,12 +7,11 @@ if [ -d "${HOME}/METIS" ]; then
   exit 0
 fi
 
-
-mkdir ${HOME}/METIS
 wget http://ppmcore.mpi-cbg.de/upload/metis-5.1.0.tar.gz
 tar -xf metis-5.1.0.tar.gz
 cd metis-5.1.0
 make config shared=1 prefix=${HOME}/METIS
 make -j 4
+mkdir ${HOME}/METIS
 make install
 

src/Grid/staggered_grid.hpp

+/*
+ * staggered_grid.hpp
+ *
+ *  Created on: Aug 19, 2015
+ *      Author: i-bird
+ */
+
+#ifndef SRC_GRID_STAGGERED_GRID_HPP_
+#define SRC_GRID_STAGGERED_GRID_HPP_
+
+typedef boost::mpl::vector stag_elements;
+
+/*! \brief Implementation of the staggered grid
+ *
+ * \param dim Dimensionality od the staggered grid
+ * \param ele elements object on each dimensional objects, must be a stag_elements
+ *
+ *
+ *
+ */
+template <unsigned int dim, typename ele>
+class staggered_grid
+{
+
+};
+
+
+#endif /* SRC_GRID_STAGGERED_GRID_HPP_ */