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Commit 25ed1a5f authored by Holger Brandl's avatar Holger Brandl
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cont. dge analysis for stefania

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R/bio/diffex_commons.R
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...@@ -140,7 +140,7 @@ DEF_DAVID_ONTOLOGIES=ontologies=c("GOTERM_CC_FAT", "GOTERM_MF_FAT", "GOTERM_BP_F ...@@ -140,7 +140,7 @@ DEF_DAVID_ONTOLOGIES=ontologies=c("GOTERM_CC_FAT", "GOTERM_MF_FAT", "GOTERM_BP_F
davidAnnotationChart <- function( someGenes, ontologies=DEF_DAVID_ONTOLOGIES ){ davidAnnotationChart <- function( someGenes, ontologies=DEF_DAVID_ONTOLOGIES ){
require(RDAVIDWebService) ## just works if installed on non-network-drive (e.g. /tmp/) require.auto(RDAVIDWebService) ## just works if installed on non-network-drive (e.g. /tmp/)
## expexted to have a column with gene_id ## expexted to have a column with gene_id
# echo("processing list with", length(someGenes), "genes") # echo("processing list with", length(someGenes), "genes")
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