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Commit 583fca0e authored by Holger Brandl's avatar Holger Brandl
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fixed fasta counter

parent 9dbabaad
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......@@ -122,7 +122,9 @@ createCuffDbTrickyDisk(getwd(), gtfFile, genomeBuild)
export -f MakeCuffDB
CountSeqs(){
grep ">" $1 | wc -l
for fasta in $*; do
grep ">" $fasta | wc -l | sed 's/^/'$fasta':\t/g'
done
}
export -f CountSeqs
......
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