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  • #22

Closed
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Created Nov 09, 2017 by herseman@hersemanOwner

write shiny app (results relative local app) for dge data

aim: explore normalized count data of diffex data

  • plot normalized counts for each replicate per condition
  • provide table with contrast details (dge data: logfc etc.)

impl better means to access summary and quality statististcs learn from https://sourceforge.net/projects/quickrnaseq example report https://github.com/baohongz/QuickRNASeq

further options:

  • provide a condition rearranger to manipulate the plot
  • include kallisto and STAR expression profiles
Edited Nov 09, 2017 by herseman
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