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Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.